Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1215 ATGAACGATGTGAAGAAAGATCATAACCAAGACCAAATTCCTGAATTGGATTTTGACAAATTGGAAGTCGTAACGGCGCTCGGCCGAGGAGCCAAAGGAGTCGTGTTCTTGGCTCGAAGTGCAGACGACGACGACGACGACGACGACGGCGAATGGCTGGCGTTGAAGGTCATTTCCAGAGCTTTGATCGAGAGGAAGGCCAAGATTGTGAATACCCAGGGCGATGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTCTCCGTCTGTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACGCCGAAAGTTGTTGGTTACGCGATTGATTATTGCAATGGGCGAGATCTTAATACTCTCAGGAAGAAACAGACCGAGAAAATGTTCTCCGATGACGTTATTAGATTTTACGCGGCGGAATTAGTTATGGCGTTGGAGTATCTACACAGCTTAGGAATAGTTTACAGAGATTTAAAGCCGGAGAACATTATGGTTCAACACAATGGTCATGTAATGCTTGTCGATTTTGATCTCTCTACGAGGCTCTCTCAGAAATCCCCCAAATCGTCTCCGTCGCCGTCGCCGTCGCCGGAGGTCTTGACGGAATCTAAATCGGCGATTAAGAAGAAGAAGAAGAAGAAGATGAAGAAAAGATTCTTTCATTTTCACCGATTCTGCAATTCCGGCGTTTCGCCGGAGGATACCGACCAACAGATGGCGGCGAAGCCAAGAATGCCGCCAGCGTCGTCAGAATCGGACTCGTCGGAGAAGTCGAACTCGTTCGTTGGAACGGAGGAGTACGTGGCACCTGAGATCGTCGCCGGGAAGGGGCATGACTTCGCCGTGGACTGGTGGTCGCTCGGAGTAGTTCTGTACGAGATGCTGTACGGAACGACGCCATTTAGAGGATCGAATCGGAAGGAAACGTTCTACCGGATTCTAACAAAGACGCCGGATCTGTGCGGCGAAGCGACGCCATTGAGGGATTTGATAAGGAAGTTGCTGGAGAAAGATCCGACGGAGAGGATCGAACTCGAGGAAATCAAGGGCCACGATTTCTTCAAAGGAACTGACTGGGATTTGGTTCTTGAAATTCCCCGGCCGCCGTCGCTGCCTGATATGGCGGCGGAGGACATAGATGGAAATAACTTAATTGATGTGGAGTCTTTTGTCCAAGATATATTTTGCAGCGAAACGGAGAAGAAGAATTGTATTAAGGGTGATGAGGGAAAAGGGCTAATTCCTACTAATTACACGGAATCTGCCATATTTCATGTATTCTGA 1293 48.49 MNDVKKDHNQDQIPELDFDKLEVVTALGRGAKGVVFLARSADDDDDDDDGEWLALKVISRALIERKAKIVNTQGDEYRRVCFEREVLRLFRHPLLPRLRGVLNTPKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYLHSLGIVYRDLKPENIMVQHNGHVMLVDFDLSTRLSQKSPKSSPSPSPSPEVLTESKSAIKKKKKKKMKKRFFHFHRFCNSGVSPEDTDQQMAAKPRMPPASSESDSSEKSNSFVGTEEYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATPLRDLIRKLLEKDPTERIELEEIKGHDFFKGTDWDLVLEIPRPPSLPDMAAEDIDGNNLIDVESFVQDIFCSETEKKNCIKGDEGKGLIPTNYTESAIFHVF 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12967454 12969040 + Tan0006700.1 Tan06g1215 755919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1215 430 FunFam Serine/threonine-protein kinase OXI1 259 376 - -
Tan06g1215 430 Gene3D Transferase(Phosphotransferase) domain 1 119 204 - -
Tan06g1215 430 Pfam Protein kinase domain 254 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1215 430 Pfam Protein kinase domain 22 205 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1215 430 SMART serkin_6 21 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1215 430 SUPERFAMILY Protein kinase-like (PK-like) 19 389 IPR011009 -
Tan06g1215 430 Gene3D Transferase(Phosphotransferase) domain 1 254 376 - -
Tan06g1215 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1215 430 MobiDBLite consensus disorder prediction 233 264 - -
Tan06g1215 430 MobiDBLite consensus disorder prediction 185 211 - -
Tan06g1215 430 FunFam Serine/threonine-protein kinase OXI1 119 187 - -
Tan06g1215 430 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Tan06g1215 430 PANTHER FLIPPASE KINASE 1-RELATED 9 380 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan06g1215 430 MobiDBLite consensus disorder prediction 185 204 - -
Tan06g1215 430 ProSiteProfiles Protein kinase domain profile. 21 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1215 Tan-Chr6:12967454 Tan07g0730 Tan-Chr7:11679552 2.30E-75 dispersed
Tan06g1215 Tan-Chr6:12967454 Tan03g1186 Tan-Chr3:68168131 2.50E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67772 PF00069 Pkinase 5.20E-30 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1215 K20714 - csv:101223223 627.861