Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g1215 | ATGAACGATGTGAAGAAAGATCATAACCAAGACCAAATTCCTGAATTGGATTTTGACAAATTGGAAGTCGTAACGGCGCTCGGCCGAGGAGCCAAAGGAGTCGTGTTCTTGGCTCGAAGTGCAGACGACGACGACGACGACGACGACGGCGAATGGCTGGCGTTGAAGGTCATTTCCAGAGCTTTGATCGAGAGGAAGGCCAAGATTGTGAATACCCAGGGCGATGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTCTCCGTCTGTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACGCCGAAAGTTGTTGGTTACGCGATTGATTATTGCAATGGGCGAGATCTTAATACTCTCAGGAAGAAACAGACCGAGAAAATGTTCTCCGATGACGTTATTAGATTTTACGCGGCGGAATTAGTTATGGCGTTGGAGTATCTACACAGCTTAGGAATAGTTTACAGAGATTTAAAGCCGGAGAACATTATGGTTCAACACAATGGTCATGTAATGCTTGTCGATTTTGATCTCTCTACGAGGCTCTCTCAGAAATCCCCCAAATCGTCTCCGTCGCCGTCGCCGTCGCCGGAGGTCTTGACGGAATCTAAATCGGCGATTAAGAAGAAGAAGAAGAAGAAGATGAAGAAAAGATTCTTTCATTTTCACCGATTCTGCAATTCCGGCGTTTCGCCGGAGGATACCGACCAACAGATGGCGGCGAAGCCAAGAATGCCGCCAGCGTCGTCAGAATCGGACTCGTCGGAGAAGTCGAACTCGTTCGTTGGAACGGAGGAGTACGTGGCACCTGAGATCGTCGCCGGGAAGGGGCATGACTTCGCCGTGGACTGGTGGTCGCTCGGAGTAGTTCTGTACGAGATGCTGTACGGAACGACGCCATTTAGAGGATCGAATCGGAAGGAAACGTTCTACCGGATTCTAACAAAGACGCCGGATCTGTGCGGCGAAGCGACGCCATTGAGGGATTTGATAAGGAAGTTGCTGGAGAAAGATCCGACGGAGAGGATCGAACTCGAGGAAATCAAGGGCCACGATTTCTTCAAAGGAACTGACTGGGATTTGGTTCTTGAAATTCCCCGGCCGCCGTCGCTGCCTGATATGGCGGCGGAGGACATAGATGGAAATAACTTAATTGATGTGGAGTCTTTTGTCCAAGATATATTTTGCAGCGAAACGGAGAAGAAGAATTGTATTAAGGGTGATGAGGGAAAAGGGCTAATTCCTACTAATTACACGGAATCTGCCATATTTCATGTATTCTGA | 1293 | 48.49 | MNDVKKDHNQDQIPELDFDKLEVVTALGRGAKGVVFLARSADDDDDDDDGEWLALKVISRALIERKAKIVNTQGDEYRRVCFEREVLRLFRHPLLPRLRGVLNTPKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYLHSLGIVYRDLKPENIMVQHNGHVMLVDFDLSTRLSQKSPKSSPSPSPSPEVLTESKSAIKKKKKKKMKKRFFHFHRFCNSGVSPEDTDQQMAAKPRMPPASSESDSSEKSNSFVGTEEYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATPLRDLIRKLLEKDPTERIELEEIKGHDFFKGTDWDLVLEIPRPPSLPDMAAEDIDGNNLIDVESFVQDIFCSETEKKNCIKGDEGKGLIPTNYTESAIFHVF | 430 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12967454 | 12969040 | + | Tan0006700.1 | Tan06g1215 | 755919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g1215 | 430 | FunFam | Serine/threonine-protein kinase OXI1 | 259 | 376 | - | - | |
Tan06g1215 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 119 | 204 | - | - | |
Tan06g1215 | 430 | Pfam | Protein kinase domain | 254 | 357 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1215 | 430 | Pfam | Protein kinase domain | 22 | 205 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1215 | 430 | SMART | serkin_6 | 21 | 357 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1215 | 430 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 389 | IPR011009 | - | |
Tan06g1215 | 430 | Gene3D | Transferase(Phosphotransferase) domain 1 | 254 | 376 | - | - | |
Tan06g1215 | 430 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 156 | 168 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan06g1215 | 430 | MobiDBLite | consensus disorder prediction | 233 | 264 | - | - | |
Tan06g1215 | 430 | MobiDBLite | consensus disorder prediction | 185 | 211 | - | - | |
Tan06g1215 | 430 | FunFam | Serine/threonine-protein kinase OXI1 | 119 | 187 | - | - | |
Tan06g1215 | 430 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 118 | - | - | |
Tan06g1215 | 430 | PANTHER | FLIPPASE KINASE 1-RELATED | 9 | 380 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Tan06g1215 | 430 | MobiDBLite | consensus disorder prediction | 185 | 204 | - | - | |
Tan06g1215 | 430 | ProSiteProfiles | Protein kinase domain profile. | 21 | 357 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1215 | Tan-Chr6:12967454 | Tan07g0730 | Tan-Chr7:11679552 | 2.30E-75 | dispersed | |
Tan06g1215 | Tan-Chr6:12967454 | Tan03g1186 | Tan-Chr3:68168131 | 2.50E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67772 | PF00069 | Pkinase | 5.20E-30 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g1215 | K20714 | - | csv:101223223 | 627.861 |