Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1296 ATGGCATTAATGGACCTGCAACTCTTGTGGGTTCGCTTCTATCTTTGCTGTGGATTTTGGATTCTTGCTTTGAGTGATCAAGATGGTTTCCTAAGCTTATCTTGTGGAGGAACTACCACCTTCACTGACTCCTCCAACATCTCATGGATTCCAGACATCGACTACATCGGCTCCGGTAACACATCAATCATCGACGATGGCGAAGTTGGATCTTTTTCCACTGGCCATGTTCGGTTCTTCCCCGATCCCCGAGCGCGAAAATGTTACAAGCTGCCAGTGAAAAATGGTTCATCATCAGTTCTCATCAGAGCTCAGTTTGTGTACAAAAACTATGACAAGCTTGGGAAGCCCCCTGCATTTTTTGTATCTGTTGGGACAGCCATAACTAGCAATGTGAACCTTACTTCTCATGACCCTTGGATTGAGGAGTTTGTATGGCCAGTTAACAAGGAAACTACTGTCTCTTTCTGTTTGCATTCCATTCCTGAGGGTAGAAGTCCTTTGATATCTTCGCTCGAACTCCGACTGCTGCCTCGAGGAGCATACGACAATGGCTTGCTTCGGAGTCGGGCTCTTAGAAAGTCCTATCGAATCAATTGTGGTTACACTAATGGATCTCTAAGGTACCCAGTCGATCGATACGATCGAATTTGGGACACAGACCGCAACTTCAAGCCATTTCATGTGTCATCAAGGTTCAAAGTTGAGGCCAACTTCGATTCAATACAAGTCAAGGAAGCTCCACCAGCTGTAGTTGTTGAAACAGCTAGAGTTTTGTTAAGAAGAGATGAGTTGAGCTACAATCTCCCTCTTGAAGAAGAAGGAGATTACTTTGTGATTTTATATTTTGGTGGGATTCTTGCTGTTCATCCTTCATTTGATGTGTTGATCAATGGGAAAGTTATAGAATCAAATTACACTCTTGAAATGGGAGAGATGAGGGCTTTGTATGTCATTCAAGAGCAAATCAAGAGCTTGAATATGACTTTCAAGAGTGTTCAATTCTATCCTCAAGTCAATGCCATTGAGGTCTATCAGATTGTTCATGTTCCTTTGGAAGCTTCATCAACTACAGTTTCAGCCCTTCAGGTGATTCATCAATCTACTGGTTTGAATTTGGGATGGGAAGATGATCCATGCTCTCCAAGAACATGGGATCATGTTGGATGTGAAGGAAACCTTGTTACATCTCTGGACCTTTCCGACATCAACTTGAGGTCGATCAGCCCGACATTTGGCGACATTCTCGATCTCAAAATACTGGATTTGCACAACACTTCATTATCAGGGCAAATAGAAAATTTGGGCAGCCTGACCCATCTTGAAAATTTGAACTTGAGTTTCAACAAGTTAACATCATTTGGATCAGATTTAGAGAACCTAAGCAACCTCAAAATTATGGACTTGCAGAACAATAGTCTTCAGGGACTGGTTCCCGACAGCTTGGGAGAACTTGAAGATCTTCGACTATTGAATTTGGAGAACAATAGGCTAGAAGGCACCCTCCCATTGTCTTTGAATAAAGGAAGTCTGGAAATTAGAACATCAGGAAACCTTTGCCTGTCTTTCTCGACAATGAGATGCAATGATGTTTCATCAAATCCAGCCATTGAAACACCACAAGTCACAGTGGTTCCTGAAACAAAAAAGGAGATGAGCAACCATAGTAACAACAATCATATGCCAATCACAATCATTGTTTGTGCAGTTGCAGCAGCTTTGCTTGTTCTCATCATTCTCTCTCTTTCGTTTCTACTCTACATGAGGAAACATTCTCAACACACAACTGAACTCACTTACTCAACAAAGGCAGCAATGGAGCTAAGGAGTTGGAACTCTGCAAAAGTATTCTCCTACAAGGAGATAAAGGCAGCTACAAACAACTTCAAGGAGGTGATTGGCAGAGGAAGCTTTGGATCTGTTTATCTTGGAAAGCTTCCTGAGGGGAAACTTGTGGCTGTCAAAGTAAGGTTTGACAAAAGCCAGCTTGGAGCTGATTCCTTTATCAATGAGGTTCATCTCTTGTCTCAAATTCGTCATCAAAATCTTGTTTGTTTGGAAGGATTTTGTAACGAATCGAAACGACAAATACTTGTTTATGAGTATTTACCTGGAGGATCCTTGGCTGACCACATCTATGGCAAGAACAAAAAAAGTGTTTCACTTAGCTGGATTATAAGATTGAAAGTTGCTGTTGATGCAGCAAAAGGGTTGGACTATTTACACAATGGGAGTGAACCAAGAATAATCCACCGTGATGTAAAGTGCAGTAATATTCTTTTGGATATGGAAATGAATGCAAAAGTTTGTGACTTTGGGCTGTCCAAGCAAATACCACATTCTGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTATTTGGATCCCGAGTATTACTCCACTCAACAATTAACCGAAAAAAGTGATGTTTATAGTTTTGGAGTTGTTTTATTAGAGCTGATTTGTGGACGAGAGCCTTTGACTCGCACTGGAACTCCGGATTCTTTCAACTTGGTGTTATGGGCAAAACCCTACTTGCAAGCAGGTGCATTTGAGATAGTAGATGAAAGTTTGAGGGGAAGCTTTGATGTTGGAAGCATGAAAAAGGCTTCTCTTATTGCTATAACGTGTGTTGAGAGAGATGCTTCTCTAAGGCCAACTATAGGACAAGTTTTGGCTGACCTTAAAGAAGCTTATGATGCACAAATTGCTTATCTTTCTACTTTTGGCCATTGA 2745 41.49 MALMDLQLLWVRFYLCCGFWILALSDQDGFLSLSCGGTTTFTDSSNISWIPDIDYIGSGNTSIIDDGEVGSFSTGHVRFFPDPRARKCYKLPVKNGSSSVLIRAQFVYKNYDKLGKPPAFFVSVGTAITSNVNLTSHDPWIEEFVWPVNKETTVSFCLHSIPEGRSPLISSLELRLLPRGAYDNGLLRSRALRKSYRINCGYTNGSLRYPVDRYDRIWDTDRNFKPFHVSSRFKVEANFDSIQVKEAPPAVVVETARVLLRRDELSYNLPLEEEGDYFVILYFGGILAVHPSFDVLINGKVIESNYTLEMGEMRALYVIQEQIKSLNMTFKSVQFYPQVNAIEVYQIVHVPLEASSTTVSALQVIHQSTGLNLGWEDDPCSPRTWDHVGCEGNLVTSLDLSDINLRSISPTFGDILDLKILDLHNTSLSGQIENLGSLTHLENLNLSFNKLTSFGSDLENLSNLKIMDLQNNSLQGLVPDSLGELEDLRLLNLENNRLEGTLPLSLNKGSLEIRTSGNLCLSFSTMRCNDVSSNPAIETPQVTVVPETKKEMSNHSNNNHMPITIIVCAVAAALLVLIILSLSFLLYMRKHSQHTTELTYSTKAAMELRSWNSAKVFSYKEIKAATNNFKEVIGRGSFGSVYLGKLPEGKLVAVKVRFDKSQLGADSFINEVHLLSQIRHQNLVCLEGFCNESKRQILVYEYLPGGSLADHIYGKNKKSVSLSWIIRLKVAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNAKVCDFGLSKQIPHSDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTRTGTPDSFNLVLWAKPYLQAGAFEIVDESLRGSFDVGSMKKASLIAITCVERDASLRPTIGQVLADLKEAYDAQIAYLSTFGH 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14960253 14995380 - Tan0015702.1 Tan06g1296 756000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1296 914 SUPERFAMILY Protein kinase-like (PK-like) 601 898 IPR011009 -
Tan06g1296 914 SMART serkin_6 627 902 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1296 914 ProSiteProfiles Leucine-rich repeat profile. 440 462 IPR001611 GO:0005515(InterPro)
Tan06g1296 914 CDD STKc_IRAK 633 900 - -
Tan06g1296 914 Pfam Malectin-like domain 33 347 IPR024788 -
Tan06g1296 914 Pfam Protein kinase domain 629 896 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1296 914 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524(InterPro)
Tan06g1296 914 SUPERFAMILY L domain-like 360 508 - -
Tan06g1296 914 FunFam serine/threonine-protein kinase PBS1-like 595 702 - -
Tan06g1296 914 PANTHER OS07G0107800 PROTEIN-RELATED 457 901 - -
Tan06g1296 914 Pfam Leucine rich repeat 440 498 IPR001611 GO:0005515(InterPro)
Tan06g1296 914 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 703 909 - -
Tan06g1296 914 SMART LRR_typ_2 438 460 IPR003591 -
Tan06g1296 914 SMART LRR_typ_2 461 484 IPR003591 -
Tan06g1296 914 SMART LRR_typ_2 485 509 IPR003591 -
Tan06g1296 914 Gene3D Ribonuclease Inhibitor 358 530 IPR032675 -
Tan06g1296 914 Gene3D Phosphorylase Kinase; domain 1 600 702 - -
Tan06g1296 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1296 914 Gene3D Transferase(Phosphotransferase) domain 1 703 909 - -
Tan06g1296 914 Gene3D - 193 348 - -
Tan06g1296 914 ProSiteProfiles Protein kinase domain profile. 627 909 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1296 Tan-Chr6:14960253 Tan08g1927 Tan-Chr8:71517396 4.30E-100 dispersed
Tan06g1296 Tan-Chr6:14960253 Tan06g1301 Tan-Chr6:15269416 1.00E-64 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67773 PF12819 Malectin_like 5.40E-52 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1296 - - - 0.0