Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1301 ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCGAAAAGAACAAAGAGTGGTAGAAAGGAACGGTCTGTTTCGTCTCATTCTCGCAGTCTTAAACAACATCATCATCAACAACAACATCCTGCTCCTCCTCCTCCACGCCCTACGCCGCCTACAGAAAATCCAAAAGAAAACCAGGTGCAAAAAGAAGCAGAGAAAGAGAAATTAGAGATTGGGGAAAAGAATAACATTGCAGCACAAACTTTCACCTTCAGAGAGCTCGCCACTGCTACAAAGAATTTCCGTCAAGAGTGTCTCATTGGAGAAGGAGGGTTTGGGAGAGTTTACAAAGGCAAACTCGACAAAACTAACCAGGTTGTAGCAGTGAAGCAGCTTGATAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAGGTTTTGATGCTAAGCTTATTACACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGTGATCAGAGACTCTTGGTTTATGAGTATATGCCTTTGGGATCTCTAGAAGATCATCTATTTGATATTCCAGCTGAGAGAAGGGCATTGGATTGGGGAACAAGGATGAAAATAGGGTTGGAAGCAGCAAAAGGGCTTGAGTACTTACACGACAAAGCCAACCCACCAGTAATTTACAGAGATTTGAAAGCATCAAACATTCTATTGGATGGTTATTTCAATGCAAAGTTGTCAGATTTTGGTTTGGCAAAGCTTGGCCCTGTTGGTGACAAATCTCATGTTTCCTCCAGAGTTATGGGAACTTATGGATATTGTGCTCCTGAGTATCAAAGAACTGGACAACTCACTCTTAAATCTGATGTCTACAGTTTTGGTGTTGTCTTGTTGGAACTCATCACTGGCAAGAGAGTCATTGACAACACTCGTCCACCTCAACAGCAAAACTTGGTCACTTGGGCCTACCCAATATTTAAAGAACCAGCTAGATTCATGGAGTTGGCAGATCCTCTTCTAGGTCGAGACTTTCCTGTCAGATCTCTAAACCAAGCAGTCGCAGTTGCCGCCATGTGCCTCCATGAGGAAGCGGCGGCTCGACCGTTGATCAGCGACGTTGTCACTGCTCTTAGCTTCTTGGGCACAGAAGCCACACAGTCGTCGTCGTCATCGTCGTCAAATGATGATCCTTCACTACTAGTATCTGATCAAAATCTGATCATTCTATCAAAATCCTATGACGACGAAAAAGCTGAGGCACGCCAGCGAGCGGTCGCTGAAGCCATCGAATGGGGTTCCTCCTCCAAGCAAAATGCTGCTGCTTCGCGCCCAGGAAGTTATTCTTCTGTGTAA 1332 44.52 MSCFPCFSSHGKAAKRTKSGRKERSVSSHSRSLKQHHHQQQHPAPPPPRPTPPTENPKENQVQKEAEKEKLEIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTNQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLFDIPAERRALDWGTRMKIGLEAAKGLEYLHDKANPPVIYRDLKASNILLDGYFNAKLSDFGLAKLGPVGDKSHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPPQQQNLVTWAYPIFKEPARFMELADPLLGRDFPVRSLNQAVAVAAMCLHEEAAARPLISDVVTALSFLGTEATQSSSSSSSNDDPSLLVSDQNLIILSKSYDDEKAEARQRAVAEAIEWGSSSKQNAAASRPGSYSSV 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15269416 15273207 - Tan0012269.1 Tan06g1301 756005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1301 443 CDD STKc_IRAK 102 370 - -
Tan06g1301 443 ProSiteProfiles Protein kinase domain profile. 96 373 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1301 443 MobiDBLite consensus disorder prediction 1 74 - -
Tan06g1301 443 MobiDBLite consensus disorder prediction 41 55 - -
Tan06g1301 443 Gene3D Transferase(Phosphotransferase) domain 1 173 398 - -
Tan06g1301 443 MobiDBLite consensus disorder prediction 60 74 - -
Tan06g1301 443 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524(InterPro)
Tan06g1301 443 FunFam Serine/threonine-protein kinase PBS1 173 388 - -
Tan06g1301 443 SUPERFAMILY Protein kinase-like (PK-like) 82 380 IPR011009 -
Tan06g1301 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1301 443 SMART serkin_6 96 373 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1301 443 MobiDBLite consensus disorder prediction 424 443 - -
Tan06g1301 443 FunFam Serine/threonine-protein kinase PBS1 65 172 - -
Tan06g1301 443 Pfam Protein kinase domain 98 313 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1301 443 PANTHER OS07G0668900 PROTEIN 40 385 - -
Tan06g1301 443 Gene3D Phosphorylase Kinase; domain 1 56 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1280 Tan-Chr4:12354703 Tan06g1301 Tan-Chr6:15269416 4.60E-57 dispersed
Tan06g1301 Tan-Chr6:15269416 Tan10g0966 Tan-Chr10:8421793 5.30E-136 dispersed
Tan09g0421 Tan-Chr9:40552955 Tan06g1301 Tan-Chr6:15269416 1.50E-73 dispersed
Tan06g1296 Tan-Chr6:14960253 Tan06g1301 Tan-Chr6:15269416 1.00E-64 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67774 PF00069 Pkinase 1.20E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1301 - - - 0.0