Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1316 ATGGAAGCCTCCTTTGCATCATATTGCCATGTTTCTTTCATCCTCTTGATTCTTTACCTCTTTCCCTACCAGCTTCTCAGCCAAGAGCCGTATGATGGAAATGCAACCAGTTGTTCTATCAATGACACTGCTCTCAAAGGATATAATTGTACTCATTATGATTCTCCTCAGTCATGTTATTCCTATTTGGCTGTAACATCCAATTCTCACACTCTTGATTGGGGTTACATTCAACTCTCACTGGGAAACAGAACTTTGCTCATGAATAAAGCTTATTGCACATGTGTGGGTTCTTTCTATCAGTCCTCAAACAATGGTTATTCAATTCAGAGGGGGGACAGTTATGAAAAAATAGCAAACGATATTTTCCATGGTTTCGCTAGCTGTTCCATGTTGAGAAGTGTCAACTTCAACTATTCTATTGATGATACTTCGATAGGCAAAAGTCTTCAAGTTCCGTTGCGATGTGCTTGTCCTATGAAGGCTCAAACAGCTAAGGGAATTGCCTCTTTGGTTGTGTATATGATACAACCAAATGAGACCGTTAGATCCATTGCAAGGGATTTTGGAGTTGATGAAGATAGCATTTTGGGTGCAAATATGCTTTCAAATTCGAGCCACATCTATCCATTTACGCCTCTCTTGGTTCCGTTGGGCAAAAATGAAACTTGCAGCATGGACCCATATTTCTTAATCGTAGACCCATTTGTATCAGACAACTACTGCCCTAATTTGCCTATCCCTCCTACAACGGACTTTAAACTTCTTCAGGTCGTCATCATCAGTGCAATAGGACATCAAGTATTCACTAAGAAAAGAAAACACAAACTTGGTAAAAAAAAGTTTTTCAAGCAAAATGGTGGCCATTTATTACAAGAAAAACTATTTGGAGAAAATGAGAGAGTTAAAATATTTACACAAGAAGAACTTGAACAAGCAACGGATAACTACAATGAAAATAGGTTTCTTGGTCAAGGAGGGTATGGCACAGTTTACAAGGGGATACTCCATGACAACACTATTGTTGCAATCAAAAGGTCCAAGCAAATCGAGACAAATTGGATTGAACAATTCATTAATGAAGTTATCATCCTTTCTCAAATTAACCACAGAAATATTGTTAGACTCCTGGGTTGTTGTTTGGAAACTGAGTTTCCATTACTGGTTTATGAATTCGTTTCCAATGGGACACTTTCACGACATATTCATAAAGAAGATCTTGATGAATCACCTTCTCTTTCTTGGCAAAAATGTCTCAATATCGCCTCTGAAGTTGCAGGAGCTATATCTTACATGCATTCTGCAGCTTCAATTCCCATCTTTCACAGAGATATCAAGTCTTTAAACATACTTTTGGATGATACTTATTGTGCAAAGGTTTCTGACTTTGGAACATCAAGATTTGTGTCTTGTGATCAATCTCATTTGACTACAAAAGTGCTAGGAACTTTTGGGTATATAGATCTTGAGTACTTTAGATCAAGTCAATACACTGACAAGAGTGATGTATATAGCTTTGGAGTCTTGATGGTAGAGCTTTTAACTGGGAAGCTACCTGTCACTTTTGCCAAAAATGATGGTGGGAATCTGTTAGACTACTTCATTTCACTGGAAAGGACTAATCAACTTGTTGAAATTTTAGATGTTACAGTTGCCAAAGAAGATAGGATGGAGGTTGTTAAGAATGTTGCGACACTTGCCATAAAATGTTTAAGATCAAATGGGAAAGCAAGGCTTACGATGAAACAAGTATATTTTGAATTAGAGGGATTGAGAAAGTCGCAAAATTGTTTGGGAATTGTTGAAGAAAGTCATTCAAGAACTTTGTCATTGATGCACTCCTTTGAGGTTAGTGATGATGAGCTTCTAAGATGA 1875 37.44 MEASFASYCHVSFILLILYLFPYQLLSQEPYDGNATSCSINDTALKGYNCTHYDSPQSCYSYLAVTSNSHTLDWGYIQLSLGNRTLLMNKAYCTCVGSFYQSSNNGYSIQRGDSYEKIANDIFHGFASCSMLRSVNFNYSIDDTSIGKSLQVPLRCACPMKAQTAKGIASLVVYMIQPNETVRSIARDFGVDEDSILGANMLSNSSHIYPFTPLLVPLGKNETCSMDPYFLIVDPFVSDNYCPNLPIPPTTDFKLLQVVIISAIGHQVFTKKRKHKLGKKKFFKQNGGHLLQEKLFGENERVKIFTQEELEQATDNYNENRFLGQGGYGTVYKGILHDNTIVAIKRSKQIETNWIEQFINEVIILSQINHRNIVRLLGCCLETEFPLLVYEFVSNGTLSRHIHKEDLDESPSLSWQKCLNIASEVAGAISYMHSAASIPIFHRDIKSLNILLDDTYCAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDLEYFRSSQYTDKSDVYSFGVLMVELLTGKLPVTFAKNDGGNLLDYFISLERTNQLVEILDVTVAKEDRMEVVKNVATLAIKCLRSNGKARLTMKQVYFELEGLRKSQNCLGIVEESHSRTLSLMHSFEVSDDELLR 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15719535 15732526 + Tan0006701.1 Tan06g1316 756020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1316 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1316 624 SMART serkin_6 317 586 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1316 624 ProSiteProfiles LysM domain profile. 172 216 IPR018392 -
Tan06g1316 624 Gene3D Transferase(Phosphotransferase) domain 1 393 609 - -
Tan06g1316 624 Gene3D Phosphorylase Kinase; domain 1 291 392 - -
Tan06g1316 624 Gene3D LysM domain 160 226 IPR036779 -
Tan06g1316 624 SMART LysM_2 173 217 IPR018392 -
Tan06g1316 624 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 594 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan06g1316 624 FunFam Wall-associated receptor kinase 2 393 610 - -
Tan06g1316 624 CDD LysM 172 216 IPR018392 -
Tan06g1316 624 Pfam Protein kinase domain 317 584 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1316 624 SUPERFAMILY Protein kinase-like (PK-like) 301 588 IPR011009 -
Tan06g1316 624 ProSiteProfiles Protein kinase domain profile. 317 591 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1316 624 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524(InterPro)
Tan06g1316 624 CDD STKc_IRAK 323 591 - -
Tan06g1316 624 Pfam LysM domain 174 217 IPR018392 -
Tan06g1316 624 SUPERFAMILY LysM domain 172 217 IPR036779 -
Tan06g1316 624 FunFam Wall-associated receptor kinase 2 290 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1316 Tan-Chr6:15719535 Tan06g1318 Tan-Chr6:15821162 0.00E+00 dispersed
Tan06g1316 Tan-Chr6:15719535 Tan06g1317 Tan-Chr6:15790232 4.90E-289 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67777 PF00069 Pkinase 4.70E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1316 - - - 0.0