Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1317 ATGGAAGCCTCATTTGCATCATATTGCCATGTTTCTTCGATCCTCTTAATCCTTTCCTTCTTTCCCTACCAGCTCCTCAGCCAACAGTCGTATGATGGGAATGCGACCAGTTGTTCTATCAATGACACTTCTCTCAAAGGATATAATTGTACTCATTATGGTTCTCCTGAGTCATGTGTTTCCTATTTGGCCGTAACATCCAATTCTCACACACTTGATTGGGGTTACATCCAACTTTCATTAGGAAACAGAACTTTGCTCATGAATGGACCTTATTGCACATGTAGGGGGGACAGTTATGAAAAAATAGCTAACGATATTTTTCATGGCTTCGCTAGCTGTTCCATGTTGAGAAGTGTGAATTTTAACTATTCCATTGATGATACTTCGATAGGCAAAATTCTTCAAGTTCCGTTGCGATGTGCTTGTCCTACAAAAGCTCAGGAAGCTAAGGGAATTGCCTCTTTGGTTGTGTATATGATACAACCAAATGAGACCGTTAGATCCATTGCAAGGGATTTTGGAGTTGATGAAGATAGCATTTTGGGTGGTGTTATAGTATTAGTAAGTACTTTCTTTTGTGGATGCAAAGGACATCAAGTATTCACTAAGAAAAGAAAACACAAACTTGGTAAAAAAAAGTTTTTCAAGCAAAATGGTGGCCATTTATTACAAGAAAAACTACTTGGAGAAAATGAGAGAGTTAAAATATTTACACAAGAAGAACTTGAACAAGCAACGGATAACTACAATGAAAATAGGTTTCTTGGTCAAGGAGGGTATGGCACAGTTTACAAGGGGATACTCCATGACAACACTATTGTTGCAATCAAAAGGTCCAAGCAAATCGAGACAAATTGGATTGAACAATTCATTAATGAAGTTATCATCCTTTCTCAAATTAACCACAGAAATATTGTTAGACTCCTGGGTTGTTGTTTGGAAACTGAGTTTCCATTACTGGTTTATGAATTCGTTTCCAATGGGACACTTTCACAACATATTCATAAAGAAGATCTTGATGAATCACCTTCTCTTTCTTGGGAAAATCGTCTCAATATCGCTTCTGAAGTTGCAGGAGCTATATCTTACATGCATTCTGCAGCTTCAATTCCCATCTTTCACAGAGATATCAAGTCTTTAAACATACTTTTGGATGATACTTATTGTGCAAAGGTTTCTGACTTTGGAACATCAAGATTTGTGTCTTGTGATCAATCCCATTTGACTACAAAAGTGCTCGGAACTTTTGGGTATATAGATCCTGAGTATTTTAGATCAAGTCAATACACTGAAAAGAGTGATGTATATAGTTTTGGAGTCTTAATGGTGGAGCTTTTAACTGGGAAGCTACCTGTTACTTTTGCCAAAAATGATGGTGGGAATCTATTAGACTACTTCATTTCATTGGAAAGGACTAATCAACTTGTTGAAATTTTAGATGTTACCATTGCCAAGGAAGAAAGGATAGAGGTTGTTAAGAATGTCGCGACACTTGCCATTAAATGTTTAAGATCAAATGGGAAAGCAAGGCCTACGATGAAAGAAGTATATTTGGAACTAGAGGGATTGAGAAAGTCACAAAATTGTTTGGGAATTGTGGAAGAGAGTCATTCAAGAACTTTGTCATTGATGCACTCCTTTGAGATTAGTGATGGCGAGCTTCTAAGATGA 1674 37.04 MEASFASYCHVSSILLILSFFPYQLLSQQSYDGNATSCSINDTSLKGYNCTHYGSPESCVSYLAVTSNSHTLDWGYIQLSLGNRTLLMNGPYCTCRGDSYEKIANDIFHGFASCSMLRSVNFNYSIDDTSIGKILQVPLRCACPTKAQEAKGIASLVVYMIQPNETVRSIARDFGVDEDSILGGVIVLVSTFFCGCKGHQVFTKKRKHKLGKKKFFKQNGGHLLQEKLLGENERVKIFTQEELEQATDNYNENRFLGQGGYGTVYKGILHDNTIVAIKRSKQIETNWIEQFINEVIILSQINHRNIVRLLGCCLETEFPLLVYEFVSNGTLSQHIHKEDLDESPSLSWENRLNIASEVAGAISYMHSAASIPIFHRDIKSLNILLDDTYCAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEYFRSSQYTEKSDVYSFGVLMVELLTGKLPVTFAKNDGGNLLDYFISLERTNQLVEILDVTIAKEERIEVVKNVATLAIKCLRSNGKARPTMKEVYLELEGLRKSQNCLGIVEESHSRTLSLMHSFEISDGELLR 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15790232 15793210 + Tan0022391.1 Tan06g1317 756021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1317 557 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 68 527 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Tan06g1317 557 ProSiteProfiles Protein kinase domain profile. 250 524 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1317 557 FunFam Wall-associated receptor kinase 2 326 543 - -
Tan06g1317 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1317 557 Pfam Protein kinase domain 250 517 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1317 557 Gene3D Transferase(Phosphotransferase) domain 1 326 542 - -
Tan06g1317 557 ProSitePatterns Protein kinases ATP-binding region signature. 256 278 IPR017441 GO:0005524(InterPro)
Tan06g1317 557 Gene3D Phosphorylase Kinase; domain 1 224 325 - -
Tan06g1317 557 FunFam Wall-associated receptor kinase 2 223 325 - -
Tan06g1317 557 SUPERFAMILY Protein kinase-like (PK-like) 235 521 IPR011009 -
Tan06g1317 557 SMART serkin_6 250 524 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1317 557 CDD STKc_IRAK 256 524 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1317 Tan-Chr6:15790232 Tan06g1320 Tan-Chr6:15882723 1.40E-266 dispersed
Tan06g1316 Tan-Chr6:15719535 Tan06g1317 Tan-Chr6:15790232 4.90E-289 tandem
Tan06g1317 Tan-Chr6:15790232 Tan06g1318 Tan-Chr6:15821162 2.30E-285 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67778 PF00069 Pkinase 5.20E-52 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1317 - - - 0.0