Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1322 ATGGCGATTCTGAAGCTTTTAGCTCTCTGCATTTCATTCTTCTTGTTGATCAGAGCCCCTGTACGAGGTGATTCCTTACATTTCCCTTCTTCTTCTTCTTCTTCTTTTTCTTCTGATGTTCAGCTTCTATTGGGAAAGATCAGAGCTTCACTTGAAGGTGACTCTCAAAACTTGCTTTTGTCTTCATGGAATTACTCTTTGCCTCTTTGTCAATGGAGGGGACTCAAATGGGTTTTCTCTAGTGGAACTCCTCTGGTTTGCAGTGGTTCTTCTTCTCCACAGTGGTCTAATCTCACTCTTTTCAAAGACCCTTCTGTTCATGTTTTCTCTCTGCAACTTCCTTCTGCTAATCTCACTGGTTCGTTGCCTAAGGAGCTTGGTGAGTTCACTATGCTCCAAAGTCTCTATCTAAGCATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTGTTGACTGGAGCTCTTCCACCGTCGATCTGGAACCTTTGTGATAAACTTGTTTCTGTCAGACTTCATGGCAATTCATTATCTGGGTCTCTGCCGGAGCCGGCTTTACCAGATTCCACCTGCAAGAATTTGGAGGCTTTGGATTTGGGCAGCAACCAGATTTCAGGTACTTTCCCAGAATTCATCACTAGATTTCAGGGTCTGAAAGAGCTTGATCTTGGGAAGAATTTGTTGTCTGGACAAATCCCTCAGAGCTTAGGCCAGTTAGAGCTAGAGAAGTTGAACCTTTCAAACAACAACTTCAGTGGAACATTGCCTGCTTTTGGTAACACAAAGTTTGGTGTGGAGGCTTTTGAAGGGAACAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGGACCTTCTCATTTGAGTTCAGGTGCCATTGCTGGCCTCGTTATTGGCTTGATGACTGGGACGGTGGTTTTAGCTTCATTGCTTATTGGCTATATGCAAAACAAGAAGAAGAAGAGTAGGAGTGAGAGTGAAGATGAGATTGACGAAGGAGAAGACGAAGAAAATGGGGGCAGTATCGGGGGTGGCACAGGTGGTGAAGGAAAACTCATTTTGTTCCAGGGCGGTGAGCATTTGACATTAGATGATGTCTTGAATGCTACAGGGCAGGTTATGGAGAAAACAAGCTATGGCACTATATATAAGGCAAAGCTTGCTGATGGAGGTACCATTGCTCTGAGACTGCTGAGGGAAGGTAGTTGCAAAGACAGAAACTCTTGTTTGTCTGTGATTAAACAGTTGGGAAAGATTCGCCATGAGAACTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGAGAGAAGCTCCTCATTTATGACTATCTGCCTATCAGAACTTTACATGATTTTCTACATGAATCTAGAGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCATTAGGCATCGCTCGGGGACTAGCTCATCTTCACACAGGTCTTGAAGTCCCCATTACACATGGTAATGTGAGATCAAAAAATGTGCTTGTGGATGACTTCTTTGCAGTGAGACTGACCGAGTTCGGGCTCGACAAGCTAATGATTCCATCAGTAGCTGACGAAATTGTGTCGCTTGCAAAGTCCGACGGGTACAAGGCACCAGAGCTGCAAAGGATGAAGAAATGCAACTCAAGAACAGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAGCCAGGAAAAAGTGGAAGAAGTGGAGAGTTTGTGGATCTGCCATCAATGGTGAAAGTGGCAGTTTTGGAGGAGACAACAATGGAGGTTTTTGATGTGGAGGTTTTGAAAGGGATTAGAAGTCCCATGGAAGATGGAGTAGTTCAGGCATTGAAGCTTGCAATGGGATGCTGTGCTCCAGTGGCTTCAGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGTTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGTCCAACAGAAACAAGAAGTGAAATTGGTACCCCATTTTGA 2052 44.3 MAILKLLALCISFFLLIRAPVRGDSLHFPSSSSSSFSSDVQLLLGKIRASLEGDSQNLLLSSWNYSLPLCQWRGLKWVFSSGTPLVCSGSSSPQWSNLTLFKDPSVHVFSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCDKLVSVRLHGNSLSGSLPEPALPDSTCKNLEALDLGSNQISGTFPEFITRFQGLKELDLGKNLLSGQIPQSLGQLELEKLNLSNNNFSGTLPAFGNTKFGVEAFEGNSPGLCGEPLKSCAGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSRSESEDEIDEGEDEENGGSIGGGTGGEGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAVRLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRSGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEDGVVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16002114 16005737 - Tan0008957.1 Tan06g1322 756026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1322 683 MobiDBLite consensus disorder prediction 336 359 - -
Tan06g1322 683 Pfam Protein tyrosine and serine/threonine kinase 387 658 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1322 683 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515(InterPro)
Tan06g1322 683 Pfam Leucine Rich Repeat 132 151 IPR001611 GO:0005515(InterPro)
Tan06g1322 683 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 104 195 - -
Tan06g1322 683 SUPERFAMILY L domain-like 53 271 - -
Tan06g1322 683 Gene3D Phosphorylase Kinase; domain 1 369 459 - -
Tan06g1322 683 Gene3D Transferase(Phosphotransferase) domain 1 461 676 - -
Tan06g1322 683 Gene3D Ribonuclease Inhibitor 181 299 IPR032675 -
Tan06g1322 683 MobiDBLite consensus disorder prediction 663 683 - -
Tan06g1322 683 FunFam Leucine-rich repeat receptor-like protein kinase 205 297 - -
Tan06g1322 683 ProSiteProfiles Protein kinase domain profile. 383 683 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1322 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 108 665 IPR052451 -
Tan06g1322 683 MobiDBLite consensus disorder prediction 664 683 - -
Tan06g1322 683 Pfam Leucine rich repeat 207 265 IPR001611 GO:0005515(InterPro)
Tan06g1322 683 SUPERFAMILY Protein kinase-like (PK-like) 388 659 IPR011009 -
Tan06g1322 683 Gene3D Ribonuclease Inhibitor 40 180 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1322 Tan-Chr6:16002114 Tan08g2186 Tan-Chr8:73573738 2.60E-65 dispersed
Tan06g1322 Tan-Chr6:16002114 Tan09g1335 Tan-Chr9:65636570 2.70E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67781 PF07714 PK_Tyr_Ser-Thr 5.30E-26 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1322 - - - 0.0