Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g1324 | ATGAAAGAGCTTGTGGAATTTCATTCTCAAGATCTGCATGCAGGGTTTGTAAATGAACAACAAGAAGATCAAATGGATCACACACGGATCTGGCTTCATGATCACAACCAACAACAACAACATCAACATCAAAATCATCAAAATTTTCTGTCTGATGATGATGATACTCTAATGTTCTACTCGGATTTCCCTCCGCTGCCTGATTTTTCTTGCATGTCGTCGTCTTCATCGTCATCTTCAACTCCGGCACCGGTCAAGGCCACGGCTTCATCGTCGTCGACCTCCTCCTCTTCCTCAGCCAGTTCATGGGCAGTTTTGAAATCCGATGCTGATGAAACCACTGAAGATATCAGAACAAATGATAATAACTCCGCCTCCGCTACTGCCACTGCCACCGCCACCGCCGCAGCCATGACATCCCCTCCGGCGGCAGAGACCGGGTTCAAGGGCGGCGATTGTACGGACGAAATGATGATGGAGACATTCGGATACATGGATTTACTGGAAGATAGCAACGAGTATTTCGATCCGACGTGTATTTTTCAAAGCGAACAACAAGAACAGCAACAAGACCCTTTGGAGGATTTGCATTTGGAAAGCTTTGAAGAAGTGGAAATGGAGGATTTGATGATGATGCATGAAGAAGGTGAAAATAGAAATGATAATATAGGGGAGAAGCAAAACGACGTCGTAGTGGAAGAGGAGGATATGGCGAAGGTGTTTTTGGAGTGGCTGAGGAGTAATAGAGAGACTGTTTCTGCTGATGATTTGAGAAATGTGAGAATAAAAAAAGCCACTATTGAAAGCGCCGCCCGACGACTTGGCGGCGGCAAGGAGGGAATGAAACAGCTTTTGAAGCTTATTCTTGAATGGGTTCAAACCAATCATCTTCACAAGCGGAAATTCAAAGACCTCACTGATCAAACTCCTCATTTGTTAGGGTTTCAAAACCCTAATTCCTCCAACCTACCCTGGATCCAAGCCCCACCGCCACTGCCGCCTCCGCCGTTGTATTCTCCGCCAGTGCTCGGGTATGTCCCGGGCGGGGGCGGAGATGCTTATGGCAGTGCCCGTGCCTTTACCGATCATTACCAGTTACTTGACTCCTCCCTCTCCTGGAGTAATAGTAATAATAATAATAATAATAATAATTTGTCGATGCAGTTTGGGCTCCCGTCGCCGCATTTCAACTCGTTTGTTGATAATTTTGCGGCGGGCGCTCCTCCGCCACCGCCGCAACCACAGGGTTTTGTGGCGGGATACGGTGGGGGGCATCAGTACCCGTATGTGGGTCAATACTTTCAAGGGCCGGGCGGTGGCTGTGGTGGCGGGGGTGATAATGGTTTGGTTAGGTTGGATTCATCGGCGACAAAGGAGGCTCGGAAGAAGAGAATGGCGAGGCAGCGGAGATTCTCGGCCCACCACCGCCACCATCATGGCAGCCACCACCACCATGGCAGTAGCCACCAAAATCAGCATCCGACTCAAATGAATGCTAATGCTTCCGATCATTGCACCATGGCTACAACTGCTCAGCCCAATGCTGGAAACTGGGTCTACTGGCCATCCCCCACCGGCGCCGGGGGCTCTTCCACCACATCTTCTGGTTTTCCGGTGGACTCGCCGCCTGTGCATACGATTGATCGGTCTAATTCTTCCATGCAAAATCAGAACTATCCATCCCGAATTCCATCGGATCGGCGACAGGGATGGAAACCAGAGAAAAATTTGAGGTTCCTTTTACAGAAGGTGTTGAAGCAAAGCGATGTGGGCAATTTGGGGAGAATTGTCCTGCCAAAGAAAGAAGCAGAAACCCATCTCCCAGAATTGGAGGCAAGAGATGGCATTTCCATTGCCATGGAAGACATTGGAACTTCTAGAGTTTGGAATATGCGTTATAGGTATTGGCCAAACAACAAAAGCAGAATGTATCTTCTTGAAAACACAGGGGACTTTGTGAGAGCCAATGGACTTCAAGAAGGAGACTTCATTGTCATATACTCAGACGTCAAGTGTGGGAAATATATGATTCGAGGGGTGAAAGTACGGCAACCGGGGTCGAAACCCGAGAGCAAGAGGCCGGGGAAATCGCAGAGAAGCCATTCGACCGCCGGTGCCAATGGCTCGTCACTTCACCAACGACCGCCACCACCCCGAAAAGGCACTGAAGAAGTATGA | 2178 | 49.13 | MKELVEFHSQDLHAGFVNEQQEDQMDHTRIWLHDHNQQQQHQHQNHQNFLSDDDDTLMFYSDFPPLPDFSCMSSSSSSSSTPAPVKATASSSSTSSSSSASSWAVLKSDADETTEDIRTNDNNSASATATATATAAAMTSPPAAETGFKGGDCTDEMMMETFGYMDLLEDSNEYFDPTCIFQSEQQEQQQDPLEDLHLESFEEVEMEDLMMMHEEGENRNDNIGEKQNDVVVEEEDMAKVFLEWLRSNRETVSADDLRNVRIKKATIESAARRLGGGKEGMKQLLKLILEWVQTNHLHKRKFKDLTDQTPHLLGFQNPNSSNLPWIQAPPPLPPPPLYSPPVLGYVPGGGGDAYGSARAFTDHYQLLDSSLSWSNSNNNNNNNNLSMQFGLPSPHFNSFVDNFAAGAPPPPPQPQGFVAGYGGGHQYPYVGQYFQGPGGGCGGGGDNGLVRLDSSATKEARKKRMARQRRFSAHHRHHHGSHHHHGSSHQNQHPTQMNANASDHCTMATTAQPNAGNWVYWPSPTGAGGSSTTSSGFPVDSPPVHTIDRSNSSMQNQNYPSRIPSDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQPGSKPESKRPGKSQRSHSTAGANGSSLHQRPPPPRKGTEEV | 725 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 16055370 | 16058393 | - | Tan0019475.1 | Tan06g1324 | 756028 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g1324 | 725 | CDD | BfiI_C_EcoRII_N_B3 | 579 | 680 | - | - | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 71 | 151 | - | - | |
Tan06g1324 | 725 | SUPERFAMILY | DNA-binding pseudobarrel domain | 580 | 676 | IPR015300 | - | |
Tan06g1324 | 725 | FunFam | B3 domain-containing transcription factor FUS3 | 577 | 691 | - | - | |
Tan06g1324 | 725 | Pfam | B3 DNA binding domain | 582 | 678 | IPR003340 | GO:0003677(InterPro) | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 456 | 499 | - | - | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 462 | 489 | - | - | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 119 | 139 | - | - | |
Tan06g1324 | 725 | SMART | B3_2 | 581 | 683 | IPR003340 | GO:0003677(InterPro) | |
Tan06g1324 | 725 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 236 | 692 | IPR044800 | GO:0003700(InterPro) | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 71 | 108 | - | - | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 683 | 725 | - | - | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 516 | 569 | - | - | |
Tan06g1324 | 725 | ProSiteProfiles | B3 DNA-binding domain profile. | 581 | 683 | IPR003340 | GO:0003677(InterPro) | |
Tan06g1324 | 725 | MobiDBLite | consensus disorder prediction | 516 | 564 | - | - | |
Tan06g1324 | 725 | Gene3D | - | 577 | 693 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g2488 | Tan-Chr3:78297862 | Tan06g1324 | Tan-Chr6:16055370 | 4.90E-28 | dispersed | |
Tan06g1324 | Tan-Chr6:16055370 | Tan11g1474 | Tan-Chr11:13450125 | 1.40E-32 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27762 | PF02362 | B3 | 1.90E-17 | CL0405 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g1324 | K09287 | - | csv:101204282 | 949.888 |