Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1324 ATGAAAGAGCTTGTGGAATTTCATTCTCAAGATCTGCATGCAGGGTTTGTAAATGAACAACAAGAAGATCAAATGGATCACACACGGATCTGGCTTCATGATCACAACCAACAACAACAACATCAACATCAAAATCATCAAAATTTTCTGTCTGATGATGATGATACTCTAATGTTCTACTCGGATTTCCCTCCGCTGCCTGATTTTTCTTGCATGTCGTCGTCTTCATCGTCATCTTCAACTCCGGCACCGGTCAAGGCCACGGCTTCATCGTCGTCGACCTCCTCCTCTTCCTCAGCCAGTTCATGGGCAGTTTTGAAATCCGATGCTGATGAAACCACTGAAGATATCAGAACAAATGATAATAACTCCGCCTCCGCTACTGCCACTGCCACCGCCACCGCCGCAGCCATGACATCCCCTCCGGCGGCAGAGACCGGGTTCAAGGGCGGCGATTGTACGGACGAAATGATGATGGAGACATTCGGATACATGGATTTACTGGAAGATAGCAACGAGTATTTCGATCCGACGTGTATTTTTCAAAGCGAACAACAAGAACAGCAACAAGACCCTTTGGAGGATTTGCATTTGGAAAGCTTTGAAGAAGTGGAAATGGAGGATTTGATGATGATGCATGAAGAAGGTGAAAATAGAAATGATAATATAGGGGAGAAGCAAAACGACGTCGTAGTGGAAGAGGAGGATATGGCGAAGGTGTTTTTGGAGTGGCTGAGGAGTAATAGAGAGACTGTTTCTGCTGATGATTTGAGAAATGTGAGAATAAAAAAAGCCACTATTGAAAGCGCCGCCCGACGACTTGGCGGCGGCAAGGAGGGAATGAAACAGCTTTTGAAGCTTATTCTTGAATGGGTTCAAACCAATCATCTTCACAAGCGGAAATTCAAAGACCTCACTGATCAAACTCCTCATTTGTTAGGGTTTCAAAACCCTAATTCCTCCAACCTACCCTGGATCCAAGCCCCACCGCCACTGCCGCCTCCGCCGTTGTATTCTCCGCCAGTGCTCGGGTATGTCCCGGGCGGGGGCGGAGATGCTTATGGCAGTGCCCGTGCCTTTACCGATCATTACCAGTTACTTGACTCCTCCCTCTCCTGGAGTAATAGTAATAATAATAATAATAATAATAATTTGTCGATGCAGTTTGGGCTCCCGTCGCCGCATTTCAACTCGTTTGTTGATAATTTTGCGGCGGGCGCTCCTCCGCCACCGCCGCAACCACAGGGTTTTGTGGCGGGATACGGTGGGGGGCATCAGTACCCGTATGTGGGTCAATACTTTCAAGGGCCGGGCGGTGGCTGTGGTGGCGGGGGTGATAATGGTTTGGTTAGGTTGGATTCATCGGCGACAAAGGAGGCTCGGAAGAAGAGAATGGCGAGGCAGCGGAGATTCTCGGCCCACCACCGCCACCATCATGGCAGCCACCACCACCATGGCAGTAGCCACCAAAATCAGCATCCGACTCAAATGAATGCTAATGCTTCCGATCATTGCACCATGGCTACAACTGCTCAGCCCAATGCTGGAAACTGGGTCTACTGGCCATCCCCCACCGGCGCCGGGGGCTCTTCCACCACATCTTCTGGTTTTCCGGTGGACTCGCCGCCTGTGCATACGATTGATCGGTCTAATTCTTCCATGCAAAATCAGAACTATCCATCCCGAATTCCATCGGATCGGCGACAGGGATGGAAACCAGAGAAAAATTTGAGGTTCCTTTTACAGAAGGTGTTGAAGCAAAGCGATGTGGGCAATTTGGGGAGAATTGTCCTGCCAAAGAAAGAAGCAGAAACCCATCTCCCAGAATTGGAGGCAAGAGATGGCATTTCCATTGCCATGGAAGACATTGGAACTTCTAGAGTTTGGAATATGCGTTATAGGTATTGGCCAAACAACAAAAGCAGAATGTATCTTCTTGAAAACACAGGGGACTTTGTGAGAGCCAATGGACTTCAAGAAGGAGACTTCATTGTCATATACTCAGACGTCAAGTGTGGGAAATATATGATTCGAGGGGTGAAAGTACGGCAACCGGGGTCGAAACCCGAGAGCAAGAGGCCGGGGAAATCGCAGAGAAGCCATTCGACCGCCGGTGCCAATGGCTCGTCACTTCACCAACGACCGCCACCACCCCGAAAAGGCACTGAAGAAGTATGA 2178 49.13 MKELVEFHSQDLHAGFVNEQQEDQMDHTRIWLHDHNQQQQHQHQNHQNFLSDDDDTLMFYSDFPPLPDFSCMSSSSSSSSTPAPVKATASSSSTSSSSSASSWAVLKSDADETTEDIRTNDNNSASATATATATAAAMTSPPAAETGFKGGDCTDEMMMETFGYMDLLEDSNEYFDPTCIFQSEQQEQQQDPLEDLHLESFEEVEMEDLMMMHEEGENRNDNIGEKQNDVVVEEEDMAKVFLEWLRSNRETVSADDLRNVRIKKATIESAARRLGGGKEGMKQLLKLILEWVQTNHLHKRKFKDLTDQTPHLLGFQNPNSSNLPWIQAPPPLPPPPLYSPPVLGYVPGGGGDAYGSARAFTDHYQLLDSSLSWSNSNNNNNNNNLSMQFGLPSPHFNSFVDNFAAGAPPPPPQPQGFVAGYGGGHQYPYVGQYFQGPGGGCGGGGDNGLVRLDSSATKEARKKRMARQRRFSAHHRHHHGSHHHHGSSHQNQHPTQMNANASDHCTMATTAQPNAGNWVYWPSPTGAGGSSTTSSGFPVDSPPVHTIDRSNSSMQNQNYPSRIPSDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQPGSKPESKRPGKSQRSHSTAGANGSSLHQRPPPPRKGTEEV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16055370 16058393 - Tan0019475.1 Tan06g1324 756028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1324 725 CDD BfiI_C_EcoRII_N_B3 579 680 - -
Tan06g1324 725 MobiDBLite consensus disorder prediction 71 151 - -
Tan06g1324 725 SUPERFAMILY DNA-binding pseudobarrel domain 580 676 IPR015300 -
Tan06g1324 725 FunFam B3 domain-containing transcription factor FUS3 577 691 - -
Tan06g1324 725 Pfam B3 DNA binding domain 582 678 IPR003340 GO:0003677(InterPro)
Tan06g1324 725 MobiDBLite consensus disorder prediction 456 499 - -
Tan06g1324 725 MobiDBLite consensus disorder prediction 462 489 - -
Tan06g1324 725 MobiDBLite consensus disorder prediction 119 139 - -
Tan06g1324 725 SMART B3_2 581 683 IPR003340 GO:0003677(InterPro)
Tan06g1324 725 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 236 692 IPR044800 GO:0003700(InterPro)
Tan06g1324 725 MobiDBLite consensus disorder prediction 71 108 - -
Tan06g1324 725 MobiDBLite consensus disorder prediction 683 725 - -
Tan06g1324 725 MobiDBLite consensus disorder prediction 516 569 - -
Tan06g1324 725 ProSiteProfiles B3 DNA-binding domain profile. 581 683 IPR003340 GO:0003677(InterPro)
Tan06g1324 725 MobiDBLite consensus disorder prediction 516 564 - -
Tan06g1324 725 Gene3D - 577 693 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2488 Tan-Chr3:78297862 Tan06g1324 Tan-Chr6:16055370 4.90E-28 dispersed
Tan06g1324 Tan-Chr6:16055370 Tan11g1474 Tan-Chr11:13450125 1.40E-32 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27762 PF02362 B3 1.90E-17 CL0405 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1324 K09287 - csv:101204282 949.888