Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1420 ATGGAAACCACCGGGTATTTTTCACTCTTAATCATCTTCTTCACTTTGATTTTCATTTTTTTGTTGCAGAAAAGAAAAACCAGAACAAAAAATCTTCCTCCCAGTCCTCTGGCCCTCCCTGTAATCGGCCATCTCCATCTCCTCAAACACCCAATCCACAGAACCCTACAATCTCTCTCTCAAAAATACGGCCCAATTTTCACTCTCCGCCTCGGCTCTCGTCTCGTCGTCGTCGTCTCCTCCACATCCGCCGTCGAAGAATGCTTCACCACAAACGACATCGTTTTCGCCAACCGTCCCGAATTCGTCTCCGGCAAGTACCTCAGCTACGGCAACAGCACCCTCGGAGCCGCCCCGTACGGTGACCACTGGCGCAATCTCCGCCGCCTTAGCGCTACGGAAGTCTTGTCGTCCATCCGCCTCAACACGTCCGCCGGAATCCGAAGGGAAGAAATCAATATTTTACTGCGGAAACTATATGGAGTTTCGGGCCGGGATTTTGGGAAAGTGAAGTTGAAATCGCTGTTTTCGGAGTTGACGTTTAACATCATTATGAGAATGGTGGCCGGAAAACGGTATTACGGCGACCAAGTGACGGAATTGGAAGAAGCAGCGAAGTTCAGAGAAATTATGGAGAAGGCGTTTCAATTGGGGTCATATCCTGGCGATTTCTTGCCTTTTCTGAAGTGGGTTGATCGGCAATACACGAAACGAGTGGAAAGTCTCGGGAGAGACACGGATTCTTTCTTGCAGAATTTGGTGGATGAACATCGGAGAGATTTACGAGAAGGGAAGAAGCTAAATACCATGATCAGCCATTTGCTCTGTTTGCAGGAGTCTCAGGCTGACTATTACACCGATGATATTATCAAAGGCCTTATCGTTACAATTTTATCAGCAGCAACCGAAACATCGTCGGTGACAATAGAGTGGGCAATGTCGAATCTACTAAACCATCCAGAAGCATTAAAAAAGGCAAGAGACGAACTAGACACCCAAATCGGACAAGATCGTTTTCTAGACGAAGAAGACATTCCCAATCTACAATACCTTCAAAACGTGATCTCTGAGACACTGCGCTTATATCCAGCAGCTCCACTTTTAGCTCCACATCTATCATCAGACAGTTGCACTTTAGGAGGATATCATATTCCTCAGGACACGATCTTAATGGTCAATGCCTGGGCCGTCCAAAGGGATCCCAAAGTTTGGGATGACTCAACAAGCTTTAAACCAGAGAGGTTCGAAAGTGGGGGAGGATCAGGGGCCAACGCCTACAAATTCTTGCCCTTTGGATTGGGCAGGAGGGCTTGCCCTGGCATGGGCATGGCTAACCGTGTGGTGGGCTTCACTTTGGGTTCGTTAATTCAGGGGTTTGAGTGGAAGAGGGTTGGTGATATGGAAATTGATATGACTGAAGGCCAAGGAATCTCTATGCCTAAAGTTGAGCCATTGGAGGCCTTGTGTAGACCTCGCCCCATCATGGAAAAGATCATTGCTATTTGA 1506 47.54 METTGYFSLLIIFFTLIFIFLLQKRKTRTKNLPPSPLALPVIGHLHLLKHPIHRTLQSLSQKYGPIFTLRLGSRLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNTSAGIRREEINILLRKLYGVSGRDFGKVKLKSLFSELTFNIIMRMVAGKRYYGDQVTELEEAAKFREIMEKAFQLGSYPGDFLPFLKWVDRQYTKRVESLGRDTDSFLQNLVDEHRRDLREGKKLNTMISHLLCLQESQADYYTDDIIKGLIVTILSAATETSSVTIEWAMSNLLNHPEALKKARDELDTQIGQDRFLDEEDIPNLQYLQNVISETLRLYPAAPLLAPHLSSDSCTLGGYHIPQDTILMVNAWAVQRDPKVWDDSTSFKPERFESGGGSGANAYKFLPFGLGRRACPGMGMANRVVGFTLGSLIQGFEWKRVGDMEIDMTEGQGISMPKVEPLEALCRPRPIMEKIIAI 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18554938 18556740 + Tan0005051.1 Tan06g1420 756124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1420 501 Pfam Cytochrome P450 33 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 FunFam Cytochrome P450 family protein 23 495 - -
Tan06g1420 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan06g1420 501 Gene3D Cytochrome P450 18 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 CDD CYP81 64 485 - -
Tan06g1420 501 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan06g1420 501 PANTHER CYTOCHROME P450 82C3-RELATED 12 492 IPR050651 -
Tan06g1420 501 SUPERFAMILY Cytochrome P450 33 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4726 Tan-Chr1:113119996 Tan06g1420 Tan-Chr6:18554938 9.00E-71 dispersed
Tan05g1583 Tan-Chr5:37152090 Tan06g1420 Tan-Chr6:18554938 2.40E-153 dispersed
Tan05g1591 Tan-Chr5:38367440 Tan06g1420 Tan-Chr6:18554938 8.60E-159 dispersed
Tan05g1592 Tan-Chr5:38488834 Tan06g1420 Tan-Chr6:18554938 1.00E-132 dispersed
Tan06g1420 Tan-Chr6:18554938 Tan08g1464 Tan-Chr8:60149841 8.20E-85 dispersed
Tan06g1419 Tan-Chr6:18488216 Tan06g1420 Tan-Chr6:18554938 1.10E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1420 K13260 - cmo:103498908 807.749