Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1468 ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAGGAGGAGAAGCTGAATCCTGAAAAGGAAAGCGATGATGGCAAGCAAGACCATCCAATGGTTCCACCGAACATTGCCAAATTACCTTCTGGAATAGACAAACTTAGATCAAAAAGTAATGGAGGTTCGAAAAGGGAACAGCAGCAGATCCCCAAGGATGCGCCTCTTGTCAATATTTCTGCTCAAACATTCACTTTCCGGGAGCTTGCAATTGCGACGAAGAATTTTAGACCTGAGTGTTTTATTGGGGAAGGAGGATTTGGGCGTGTATACAAAGGGCGGCTTGAAAGCACTGGCCAGATTGTTGCTGTTAAACAGTTAGATAGGAATGGTCTTCAAGGTAACAGAGAATTTCTAGTGGAGGTTCTCATGCTTAGCCTTCTACATCATCCAAATTTGGTGAATCTGATTGGTTACTGTGCGGATGGGGATCAACGGCTTCTTGTGTATGAGTTCATGCCTTTGGGGTCATTGGAAGATCATCTTCATGAAATTCCACCTGATAAGGAACCCCTGGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGAGGTTTAGAGTACTTGCATGACAAGGCAAACCCTCCAGTTATTTATAGAGATTTCAAATCCTCCAATATATTACTTGATGAAGGATACCATCCAAAGCTTTCTGATTTTGGCCTTGCAAAGCTTGGCCCTGTTGGAGATAAATCTCATGTTTCCACCAGGGTCATGGGAACTTATGGTTACTGTGCTCCCGAATACGCCATGACTGGACAATTAACCGTGAAGTCTGATGTTTATAGTTTCGGTGTTGTCTTCTTAGAGTTGATTACTGGACGGAGAGCCATTGATAGCACCCGACCCCAAGGTGAACAGAACCTTGTCACATGGGCACGCCCATTTTTTAACGATCGCAGAAGATTCTCGAAATTGGCTGATCCACAGTTGCAGGGGCGGTATCCCATGCGAGGTCTCTACCAGGCTTTAGCTGTGGCATCCATGTGTACCCAAGAACAGGCTGCAGCCCGTCCGCTCATTGGAGACGTGGTCACTGCCCTGTCATATTTGGCAAATCAATCCTACGATCCAAGTTCTCCTTCAGGTACTGCTGCTGCTCAGAGAGGTTCTGGTGATCGAGACGAAAGACGAAACAGAGACGAGAAAGGTGGAGGGGTAGCAAAGAATGAAGAAGGGGGAGCATCCGGACGAAGGTGGGCATTGGATGGTCCCGAGAAGGACGACTCCCCAAGGGAAACTGCTAGGATTTTGAATAGGGATTTAGACAGAGAACGTGCAGTCGCTGAGGCCAAGATGTGGGGAGAGAATTGGCGAGAAAAAAGACGACAGAGCACACAAGGCAGTTTTGATGGCTCTAATGGGTAG 1404 46.79 MGCFPCFDSREEEKLNPEKESDDGKQDHPMVPPNIAKLPSGIDKLRSKSNGGSKREQQQIPKDAPLVNISAQTFTFRELAIATKNFRPECFIGEGGFGRVYKGRLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHEIPPDKEPLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRRAIDSTRPQGEQNLVTWARPFFNDRRRFSKLADPQLQGRYPMRGLYQALAVASMCTQEQAAARPLIGDVVTALSYLANQSYDPSSPSGTAAAQRGSGDRDERRNRDEKGGGVAKNEEGGASGRRWALDGPEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSTQGSFDGSNG 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 19782002 19788234 - Tan0012578.1 Tan06g1468 756172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1468 467 Gene3D Transferase(Phosphotransferase) domain 1 163 376 - -
Tan06g1468 467 MobiDBLite consensus disorder prediction 367 430 - -
Tan06g1468 467 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Tan06g1468 467 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Tan06g1468 467 SUPERFAMILY Protein kinase-like (PK-like) 67 360 IPR011009 -
Tan06g1468 467 CDD STKc_IRAK 92 360 - -
Tan06g1468 467 PANTHER OS07G0668900 PROTEIN 20 381 - -
Tan06g1468 467 MobiDBLite consensus disorder prediction 413 430 - -
Tan06g1468 467 MobiDBLite consensus disorder prediction 7 27 - -
Tan06g1468 467 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1468 467 MobiDBLite consensus disorder prediction 443 467 - -
Tan06g1468 467 Gene3D Phosphorylase Kinase; domain 1 47 162 - -
Tan06g1468 467 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Tan06g1468 467 MobiDBLite consensus disorder prediction 443 458 - -
Tan06g1468 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1468 467 MobiDBLite consensus disorder prediction 382 400 - -
Tan06g1468 467 Pfam Protein kinase domain 91 294 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1468 467 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2955 Tan-Chr1:68148626 Tan06g1468 Tan-Chr6:19782002 8.20E-128 dispersed
Tan06g1468 Tan-Chr6:19782002 Tan10g0966 Tan-Chr10:8421793 1.00E-185 dispersed
Tan06g1468 Tan-Chr6:19782002 Tan04g0375 Tan-Chr4:3103382 6.80E-150 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67784 PF00069 Pkinase 1.90E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1468 K13430 - csv:101219880 915.22