Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1477 ATGGCCGACGGCAAATTCGATCTCCCTGACGATCTCCTCTCCTCTCGGACGTCCGATCACTCGTGGACGCCCAAAGTGGAAGCTTCTGGAGGGAATGATGTGGAGAAGGTGCTCACGGCCTTCCTTGATGACTCAAAAGACCAAGTGGCATCAGAGAACAGCATACCTTTGTCCCCTCAATGGCTATATGCCAAACCAAGTGAAACTAAGATGGAAGTGCGTGCTCCAACTCCAGTGTCCCTTGCTAACTCTACTGATCTCAATCAGAAAGAGGGTTGGCGCCCAGATGGGTCTGAGGACAAGAAGGATTGGAGGAAAAATACTTCTGAAAATGAAAGTGGGCGCCGTTGGCGAGAGGAGGAGCGAGAAACTGGCTTACTTGGTGGTCGCCGCAGAAAAACTGAGCGTCGCATTGATAACATGTCAACTAAGGAGACAATGGAGAGTAGAGTCCTGCCTAATTCGGACAGATGGCATGATGGTCGTGCTTCTGGGCATGATAGTCGCACTTCTGGTCATGATGGTCGTACTTCTGGGCATGATAGTCGTACTTCTGGTCATGATGCACGACGTGACAACAAATGGACATTGAGGTGGGGACCAGATGACAAAGAAAAGGAAACACGCATGGACAAGCGATCAGATGCTGATAAGGAAGATGTTCGCAATGACAGTCAATCAGTGAGTGGCAATCGCCCTGCTTCTGAGCGTGATTCCGATTCACGTGATAAATGGAGGCCTCGCCATAGGATGGAAAACCATTCTGTTGGCTCAACTTCCTCTCGTGCTGCACCCGGTTTTTCACTTGAGAGAGGGCGGGGAGATGGGGGCTCTAATTTAGGATTTACTATTGGACGAGGAAGGTCAAATACTATTGGGAGATCATCTACTGGTCCCATTGGAGTTCCACTCTTGGATAAGATTGAAAATGTTCCTGGGAAACCAAGATGCTCATCTCATGCTTTTTGTTACCCTAGGGGTAAGCTTCTTGACATATATAGGAGGCAGAAGTTCGATCCATTGTTCTCAGCTCTTCGTGATGATATGGATGAATTACCGCCTGTGACTCAACCTAGTGCTGTAGAACCATTAGCTTTTGTTTCTCCGGGTTCTGAGGAGGAGGCTATCCTGGGGGACATATGGAAGGGAAAGATCACAAGTAGCGGGGTTGTATACATTCCACATAAGAAGGGGAAGCCAACTGAATGTATTTTAGGAGATGTAGTCTCCACGGAGGGAAATCAGACTGGACTGGACTTAACTTTAGTATCTGAGAATGTATCAGCAACTGCAGATGATGAAGATATTGATAATGCCACTCGAGAAGCTACAAATGACGATGCATGCCAAGATACTAGTGACAGGAGCATTTGGAGTCATCCTTCAGTGAGAGATGTTCTAGATGGAAAATATATCAGCCATAAGGAAGAGGAAAAAAGGCCCAATGCAGCCGTTTCTATGTCAAACACTGGTGGATTGGTCCACACAGTTTCTACAGTAGCCTCCCAACGTGGGATTGAGATTGGCAGTGGACACCCTGGTCCTCAGCTAAATGTTGGTGTGAATGGGCGAGCAGATTCTGATCATAGAAGGCCTCATAACTTTGATGAAATTGAGTTTTCAAATTCTTTTGATGTCAGATCCAAGCTTCCTGATGATCCTAGTTCTATTTTCTTTATTCCCTTCTCTGAGCAAAATCCAAATAAAAGTTCTGATGTGAAATTTGAGGAGTTGAGTTTGTTCTATCTCGACCCGCAAGGGGTTATTCAGGGGCCATTTATCGGGGCTGACATCATTTTGTGGTATGAACAAGGTTTCTTTGGGCTGGACTTGCCTGTTCGGTTGGCAGATGCCCCCGAAGGAACCCCATTCAGTGAGTTGGGGGAGGTTATGCCACATTTGAAAGTTAGAGAGGGAAGCGTTGATTGTGCTGATACGAAATCTCTTTCAGGCCAGTCTGGTGCCTCAGGAGGAATAATGGAGACCAATTTACTTTCTAAGCATCCAGCTCTTGATATGAATGACTCATCTGCAACAAATGAGGTTCATCGGTCATTGCCTGAATTACATAGCCTCTCCAATCAACACATTCCATCTGGAATGTCTGAGACTGAAGCACCATTTCATTTACATTCCAAGGGTCAAGGCTTTCATGATGTTGTTGCACAGGATGAAGAGATTGTGTTTTCTGGAAGGCCTGGAAGTGCTGGTTATCAAATTCCAAACTCTTCTGGGGTACTGCCTTTGGTGAGTTCTATCAGCCAACCTTGTCTTCTGAATGAGTTGACTGATCGCAGTGTGCCCGTTCAGAATGAAAATAAGTTGCACCCTTTTGGATTGCTATGGTCTGAGCTGGAAGGTACGAATATGAAACCAGTTGAAGTCACAAATTTAAAACATGCCAAGTCAGTTAACATTCCTTCAAGTATGGGAAGAACTGGACCATTGGTTGCAAAGGCGGAAGCATCTCTCAATGCAGAGACTTGGCTTGATGTTTACAGAAGAAGTATGCATTCTGACCAGAGTGTATACCAAGATGCGAATGTTGCTCATTCCCTGCCGCATATAGAACAAGAATCTAGTAGGTTTGATTTGGCCGATCAACTCATGTCGCATCAATATCATCAGGCACTTCAACAGCGGAATTTGTTGTCTCACTCTAATGAAGCTACCTTAGAGCATCATATTCAACAGCAGAATCTTATTCACCAGCAGCAGCTGTTGGCTAATAGAAGTACACCTGATCTTGATCATTTCTTGAACCTGCATATGCAACGACAGCAGATGCAGTTACAGCATCAATTACAGCAGCAGCAGTTGCATCAGCAGCAAAAGCTTTTGCAGGAACAACATCAATCTCAAGTCCAACAGGTGCTGCTTGAACAGTTGTTGCGTAGACAAATGCATGATTCAGGCCTTGGGCAGTCGCATATTGATCCAATTAGAGGTAATAATGCTCTTGATCAGGTGATACTGGAGCAACGTCTTTTACATGAGCTACAGCAACAGTCTCATCATCAACAAAGATCTGTTGATCCATCTTTTGAGCAGCTTATTAAAACAAAGTTTGGTCACTTGCCACCCCAACAAGAACATCAAAGAGATTTGTCTGAACTAATATCTCGGGCTCAGCATGGACAGATGCAATCATTGGATCATCAAATTCTCCAGCAGGAGATGCTACAGTCAAGACATTTGTCTATGGCATTAAGGCAGAGGGCCAATATGGAGGACAAGAGACATGTTGGTGGCTCTATCTGGCCAGAGGATGAGGCTGATCAGCAGTTTTTCAGAGCACATGCTGGCGCACAACGTATGCCGTCTTCAGGGTTTGAATTATACCAGCAGCAACAGAGGCAATCTCATGTAGAGCAGCTGAATCACCTTGAGCGCAATCTTTCATTTCAAGATCGGTTTAGACTAGGTCTTTATGAGCCTGCTTCACTTCCACTTGAGAGATCAATATCCTATCCTGATGTTGCTCAGGGGATGAATCTGGATGTTGTTAATGCTATGGCCCGTGCTCGTGCTTTAGAATTGCAAGAATCCAGTGCACATAATCCACCTGGTGGCCAACTGGGGCAATATGCACCTGGCACCATTCCACAGAATCCTCACCACTCTCTAGTCAGTAACCAATTTCATGTTTCACATTTTGATGGAACTGAAGGCAGCTGGTCTGAGAAAAATGACCGACATGGAAATGATTGGATGGAGTCTCGCATTCAACAACTGCATATCAATGCTGAGCAACAGAAAAGGGAGTTGGAAGCTAAAATGATTTCTGAAGACCCAACTTTATGGATGTCAGATGGGCTTAATGATGAGAAGTCAAAGCAGTTATTAATGGAGCTCCTCAATCAGAAATCTGTTCATCAACCTACAGAATCCTTGGATGTAGGAAATGGAGCATCGTTCAATAGGGCATCATCTGGCCTTTATTCTGGATCAGGCTCTCTTGATCAGTCGTTCATTCTTCATTCAGGCAAGGAAAGAGGTTTGAACAACACATTGTCAGTGGGGTCGTATGGTTCTAATTCTTATGAACCACTGCAAGATGAGCATCCTGGCAGCTTGGCAAGCAACGAGAAGGTCCCATACAGGCCAGATTCTGGCTCTGTTGTCAAGGGAGCATCAATTTTGGCTGGTCTTAAAGCCAATGGTGCAATTAACAGCTCTAGTTCTAGCGTGGCTGGTAACCTTTCTATGAATAAAGATGTCTTGGAGGTGGAGGGTAGAGCTCGAGGATTGAAAGGTGAGGGTTTGATGAAAACTCAAGCTTTTCAAATTCAAGAAAGCATTCTTGATCAAGTGGCATCTGCTGATCATGGGGAATTTTCAATGGATACCCATACCCTTAGTCGGCATTCTTCTCTTGGTTCTGCTGGTTTTCACAATGAAAAGATTGCTAGTACGTTTCCAGAAGAGATTCCTAAAGACCCGGTTACCATTCACAATAAAGATAATACTTTATTGAAACGCCCTCCTGTCTCACGAACTTCGGCATCCCAGGATGGGTTGTCTGTCCTGATTTCTGATCCGGTTGTTAGAGGGAAGAATTCAGATGGAGGAAGACCGGACCCAACTGGTATCTTGGTGAACCAAGAAAACATGGCTGCTGTGAAGAAAGAGATGCGGTTTCGGCGCTCTTCTTCTTGTAGTGACAGTGATGTATCAGAGACTTCTTTTATTGATATGCTGAAGAAGACAGCTCCACAAGAGGTTCATTCGACGACGACTGGAGTTTCAGAGCCATCAGATGGAATGCAGGGAGGGAAAGGTGGGAAAAAGAAAGGGAAGAAGGGGAGACAAATAGACCCCGCCCTACTCGGTTTCAAAGTCACCAGCAACCGAATCATGATGGGTGAAATTCAACGCTTAGACGATTAG 4890 45.09 MADGKFDLPDDLLSSRTSDHSWTPKVEASGGNDVEKVLTAFLDDSKDQVASENSIPLSPQWLYAKPSETKMEVRAPTPVSLANSTDLNQKEGWRPDGSEDKKDWRKNTSENESGRRWREEERETGLLGGRRRKTERRIDNMSTKETMESRVLPNSDRWHDGRASGHDSRTSGHDGRTSGHDSRTSGHDARRDNKWTLRWGPDDKEKETRMDKRSDADKEDVRNDSQSVSGNRPASERDSDSRDKWRPRHRMENHSVGSTSSRAAPGFSLERGRGDGGSNLGFTIGRGRSNTIGRSSTGPIGVPLLDKIENVPGKPRCSSHAFCYPRGKLLDIYRRQKFDPLFSALRDDMDELPPVTQPSAVEPLAFVSPGSEEEAILGDIWKGKITSSGVVYIPHKKGKPTECILGDVVSTEGNQTGLDLTLVSENVSATADDEDIDNATREATNDDACQDTSDRSIWSHPSVRDVLDGKYISHKEEEKRPNAAVSMSNTGGLVHTVSTVASQRGIEIGSGHPGPQLNVGVNGRADSDHRRPHNFDEIEFSNSFDVRSKLPDDPSSIFFIPFSEQNPNKSSDVKFEELSLFYLDPQGVIQGPFIGADIILWYEQGFFGLDLPVRLADAPEGTPFSELGEVMPHLKVREGSVDCADTKSLSGQSGASGGIMETNLLSKHPALDMNDSSATNEVHRSLPELHSLSNQHIPSGMSETEAPFHLHSKGQGFHDVVAQDEEIVFSGRPGSAGYQIPNSSGVLPLVSSISQPCLLNELTDRSVPVQNENKLHPFGLLWSELEGTNMKPVEVTNLKHAKSVNIPSSMGRTGPLVAKAEASLNAETWLDVYRRSMHSDQSVYQDANVAHSLPHIEQESSRFDLADQLMSHQYHQALQQRNLLSHSNEATLEHHIQQQNLIHQQQLLANRSTPDLDHFLNLHMQRQQMQLQHQLQQQQLHQQQKLLQEQHQSQVQQVLLEQLLRRQMHDSGLGQSHIDPIRGNNALDQVILEQRLLHELQQQSHHQQRSVDPSFEQLIKTKFGHLPPQQEHQRDLSELISRAQHGQMQSLDHQILQQEMLQSRHLSMALRQRANMEDKRHVGGSIWPEDEADQQFFRAHAGAQRMPSSGFELYQQQQRQSHVEQLNHLERNLSFQDRFRLGLYEPASLPLERSISYPDVAQGMNLDVVNAMARARALELQESSAHNPPGGQLGQYAPGTIPQNPHHSLVSNQFHVSHFDGTEGSWSEKNDRHGNDWMESRIQQLHINAEQQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMELLNQKSVHQPTESLDVGNGASFNRASSGLYSGSGSLDQSFILHSGKERGLNNTLSVGSYGSNSYEPLQDEHPGSLASNEKVPYRPDSGSVVKGASILAGLKANGAINSSSSSVAGNLSMNKDVLEVEGRARGLKGEGLMKTQAFQIQESILDQVASADHGEFSMDTHTLSRHSSLGSAGFHNEKIASTFPEEIPKDPVTIHNKDNTLLKRPPVSRTSASQDGLSVLISDPVVRGKNSDGGRPDPTGILVNQENMAAVKKEMRFRRSSSCSDSDVSETSFIDMLKKTAPQEVHSTTTGVSEPSDGMQGGKGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRLDD 1629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20163127 20172798 + Tan0012713.1 Tan06g1477 756181

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1477 1629 MobiDBLite consensus disorder prediction 1571 1609 - -
Tan06g1477 1629 MobiDBLite consensus disorder prediction 1572 1586 - -
Tan06g1477 1629 Coils Coil 1235 1259 - -
Tan06g1477 1629 SUPERFAMILY GYF domain 575 634 IPR035445 -
Tan06g1477 1629 MobiDBLite consensus disorder prediction 92 225 - -
Tan06g1477 1629 Pfam GYF domain 581 625 IPR003169 GO:0005515(InterPro)
Tan06g1477 1629 MobiDBLite consensus disorder prediction 235 255 - -
Tan06g1477 1629 CDD GYF 577 635 IPR003169 GO:0005515(InterPro)
Tan06g1477 1629 SMART gyf_5 578 633 IPR003169 GO:0005515(InterPro)
Tan06g1477 1629 MobiDBLite consensus disorder prediction 67 279 - -
Tan06g1477 1629 ProSiteProfiles GYF domain profile. 577 628 IPR003169 GO:0005515(InterPro)
Tan06g1477 1629 MobiDBLite consensus disorder prediction 1 30 - -
Tan06g1477 1629 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1629 - -
Tan06g1477 1629 Gene3D - 563 648 IPR035445 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1477 K18730 - - csv:101204211 2591.61
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1949 Tan-Chr2:88089500 Tan06g1477 Tan-Chr6:20163127 1.60E-32 dispersed
Tan02g1950 Tan-Chr2:88089500 Tan06g1477 Tan-Chr6:20163127 1.60E-32 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1305 . . . Bda11g00384 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy11g01812 Cme11g02345 . . . Bda11g00384 . . . Bma06g01339 Sed09g0359 . . . . . . Cpe17g00925 . Bhi12g02417 Tan06g1477 Cmetu11g1068 . . . . . . . . . . . Lsi09g01748 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003820 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44