Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1509 ATGGAACCCTATCGTCCTCAGAGGAAATCTTCCACCACAACCAGTTCATCTACCACTCTTCCCCTCTACCGCTCTGCTCCGCCTCTCGAAGTCAGGCTTGAAGAATTCGAGCTTTACGCCATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTTGAAAACCAATATGAAGCATTCACAGGCATCCGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTGGTATACTGCAGAACGGAGGACTTGAGAAAATGGTTTCTTTCTGCGGAAACTATGCTATTCCGACACCGTTTTCTTTCTGAGAGTCCTGAATCTCAGAAGCAGGTCTTTGCGGAGCTTGGCCTCTCATACAAAGCAATCAGTTATGCAGAATTTGAGGCTATAAAGGACAAACTGGTTCAAGTTGCTCGGTTGATTGGTCAACCTGTGCCAAGTGCGGATGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTTCATAACGGATATGCATATATTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTGTCAAAGGCCCTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATCGGTTGACCCCTATGGTAGAAGCCCTATGCACAAGCTACCTGGGTCCCGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGGCACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTTGCTTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCACCTTATTCCTGTCAAAAAATCATCTCATCATCACCCGGTGTTGGAGATCATCATGGATGTCCTTATAGACATTTCAGTGAAGACAACTTAAGAGCAGCACTTGGTAAAATGGGAGTAAATAACCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCTATCCATGTCTCGTCGTGTGATGCGGGGATTAATCATCCGAACCAGTACTTCATTGATAGTCAAAAGGTCCTGCAATCTAAGAACGATTCAACAACTTAA 1359 42.53 MEPYRPQRKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELLKTNMKHSQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSAETMLFRHRFLSESPESQKQVFAELGLSYKAISYAEFEAIKDKLVQVARLIGQPVPSADAIYYKVPWEEVPELVAGRRVFLHNGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTPMVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSSPGVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFESIHVSSCDAGINHPNQYFIDSQKVLQSKNDSTT 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20787859 20811811 + Tan0022420.1 Tan06g1509 756213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1509 452 MobiDBLite consensus disorder prediction 1 21 - -
Tan06g1509 452 PIRSF DNA_primase_large 2 452 IPR016558 -
Tan06g1509 452 Gene3D - 3 245 - -
Tan06g1509 452 FunFam DNA primase large subunit 4 245 - -
Tan06g1509 452 Pfam Eukaryotic and archaeal DNA primase, large subunit 172 437 IPR007238 GO:0006269(InterPro)
Tan06g1509 452 CDD PriL_PriS_Eukaryotic 22 440 IPR016558 -
Tan06g1509 452 PANTHER DNA PRIMASE LARGE SUBUNIT 15 450 IPR007238 GO:0005658(PANTHER)|GO:0006269(InterPro)|GO:0006269(PANTHER)|GO:0006270(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1509 K02685 - csv:101217274 854.358