Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g1510 | ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGGGAAGGATCTATGGATGACATGAAAAGAACTAGAGTTACTTTGCTCGAGTCGCCGTCTTCGAGATTAATTAAGAGGGCACGTACCCCCGGGAGTGGAGCCCAAGTCCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAATGCAGGGACTATCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAGCGATTCTGCCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCAACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCCTACCATTTGGTAATCAGTTACTGTCAGCCAGCAATGATGGGAGCTCTTCTTGGATTGGAACGATCAAACCCGAGAACAACGCCGCTCTTTGTGGAAGCAACTCGCTGTTCGACTTTGCTGACAGAAGAAAAAGTATGTTTCCCGGGTCGTTGGCTTGTGATTACAAAGAAAAACAACTAGCAATCTCTTGCATCCCTATAGGACTGCTTCCCAAATCATCTGACACTCAGCCATTTCTCAACGTCGGATCCAGCAATGGTGGGAATGTTCAGAAAATGCTCGGAAATGGATCGAATCGGTTCTTCGACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCATGGGGAGGTTAATAATCTAAGCTCCATGGTACAATCCAACCTCATCCCCCCAGCCCATTTCATACATAGCAACGGTCTTGGCATGGAGAGCGACCTCGTTAATTCTGGTTTGGTCTCGGACGGTAGAAGCGATGGCAGCATTCGATGCTACTCGATGTTCCAGGATGGACCTGATCATGGATCATCCATAGATTTATTCAGGTTTTGA | 993 | 46.93 | MYLRLRGIGNMGEGSMDDMKRTRVTLLESPSSRLIKRARTPGSGAQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDGSSSWIGTIKPENNAALCGSNSLFDFADRRKSMFPGSLACDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKMLGNGSNRFFDSDCALSLLSTPVEHGEVNNLSSMVQSNLIPPAHFIHSNGLGMESDLVNSGLVSDGRSDGSIRCYSMFQDGPDHGSSIDLFRF | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 20857181 | 20860392 | + | Tan0021019.1 | Tan06g1510 | 756214 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g1510 | 330 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 29 | 294 | IPR044817 | GO:0003677(InterPro) | |
Tan06g1510 | 330 | Pfam | SBP domain | 50 | 123 | IPR004333 | GO:0003677(InterPro) | |
Tan06g1510 | 330 | Gene3D | - | 41 | 111 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Tan06g1510 | 330 | ProSiteProfiles | Zinc finger SBP-type profile. | 47 | 124 | IPR004333 | GO:0003677(InterPro) | |
Tan06g1510 | 330 | SUPERFAMILY | SBT domain | 48 | 129 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Tan06g1510 | 330 | FunFam | Squamosa promoter-binding-like protein 14 | 42 | 111 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1510 | Tan-Chr6:20857181 | Tan09g2386 | Tan-Chr9:73543696 | 1.30E-49 | dispersed | |
Tan05g2981 | Tan-Chr5:81782478 | Tan06g1510 | Tan-Chr6:20857181 | 8.50E-46 | wgd | |
Tan06g1510 | Tan-Chr6:20857181 | Tan07g0089 | Tan-Chr7:3134636 | 7.20E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27779 | PF03110 | SBP | 7.40E-29 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g1510 | - | - | - | 0.0 |