Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1549 ATGATGAGAGAGAGAAGAAAGTGCTTTTTTCTCACCCTTGTGGGCATAACATTGATGAGCTGGTTTTGCATTGTGAAAGCTGAAAATACATTGCAGCCACCTGTGAAGCTAATATGGCATTACTACAAGCTTAACACAACCTGCCCTGATGCTGAGACATACATAAAACATCAAGTCAAGTTGTTTTGGGAAAAGGATAAAAACATCACTGCCAAGTTCCTCCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAATGGTTGTGATGGTTCAATACTTCTGGATGGTCGAAACTCAGAGAAAAATGCAGCACAAAACCAGGGCCTTGAAGGGTTTGAAGAAATTGACAAGATCAAGATCGTACTCGAAGATCGATGTCCTGGCGTTGTTTCTTGTGCAGACATTCTCAACTTAGCCACTAGGGATGCTGCCTCTTTGGCAGGTGCACCATCTTATCCAGTGTTTACAGGAAGAAGGGATGGTTTGACAACAAGTATTAATGCAGTGGATTTTCCATCCCCCTCCATATCATGGCAAAATGGGCTTGCATATTTCCAATCTAAAGGTCTTGATGTTTTGGACATGGCAACGCTACTAGGTGCACATTCAATGGGGAAAACACACTGTCGTCACATCATGGATAGGCTATACAATTTCAATGGCACACGAAAACCAGATCCAACAATGAACAAATCATTCTTAAAAGAGCTTCAAAAGAAATGCCCAAAAAATGCAAAAACAGACCCAACAGTGAATCTAACACAAAAATCTGGAAATGACTATCAATTTACAGGTTCCTACTACTCGAGGATCCTTTCGAAGAAGGCAGTCCTCGGCATCGATCAACAGCTTTTTTTCGGTGACGACACCAAGGAAATCGTCGAAGAGTTTGCCCCAAAATCTGGATTTGAAGACTTCCGTAGGTCCTTTGCTCTGTCCATGAGTAGGATGGGGAATATCAAGGTTTTGACCGGAAAAGATGGTGAGATTCGGCGAAATTGCCGACGAAGAAACTAG 1014 42.41 MMRERRKCFFLTLVGITLMSWFCIVKAENTLQPPVKLIWHYYKLNTTCPDAETYIKHQVKLFWEKDKNITAKFLRLLSADCLSKNGCDGSILLDGRNSEKNAAQNQGLEGFEEIDKIKIVLEDRCPGVVSCADILNLATRDAASLAGAPSYPVFTGRRDGLTTSINAVDFPSPSISWQNGLAYFQSKGLDVLDMATLLGAHSMGKTHCRHIMDRLYNFNGTRKPDPTMNKSFLKELQKKCPKNAKTDPTVNLTQKSGNDYQFTGSYYSRILSKKAVLGIDQQLFFGDDTKEIVEEFAPKSGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRNCRRRN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23736421 23742291 - Tan0004107.1 Tan06g1549 756253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1549 337 PANTHER PEROXIDASE 25-RELATED 41 333 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan06g1549 337 Pfam Peroxidase 56 297 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Tan06g1549 337 SUPERFAMILY Heme-dependent peroxidases 43 337 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 CDD secretory_peroxidase 36 335 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan06g1549 337 Gene3D Peroxidase, domain 2 171 316 - -
Tan06g1549 337 FunFam Peroxidase 171 316 - -
Tan06g1549 337 Gene3D - 41 337 - -
Tan06g1549 337 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g1549 337 ProSiteProfiles Plant heme peroxidase family profile. 36 337 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1549 Tan-Chr6:23736421 Tan09g1405 Tan-Chr9:66177062 1.10E-53 dispersed
Tan06g1549 Tan-Chr6:23736421 Tan05g1394 Tan-Chr5:19719827 4.10E-48 transposed
Tan06g1549 Tan-Chr6:23736421 Tan03g1516 Tan-Chr3:71426335 4.10E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1549 K00430 - csv:101213667 583.178