Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1555 ATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAAGCTTCTTCAACCAAAGCCATGATCATCATCATCTTCATCATCTTCACTTTTCCAATTTAGACATGCAAAGCTCCACCAGCCAGTCGTCGGAATACTCGCCGGAGCACTCTCCGTCCGCTGCTGCTGCCAACGCCGCCGCTGGAAAATGGGCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAGAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTGGCCTCCCCTTATGGCGACTCCGATCAGAAAATGGCTTCCTACTTCTTGCAAGCTCTCTTCTGCAGGGCCACTGAAACTGGCTTTAGTTGTTACAAAACCCTCGTCGCCGTTGCCGAGAAGAATCACTCCTTCGACTCCGCTCTGAGGTTGATCCTCAAATTTCAAGAGGCAAGTCCATGGACAACATTTGGGCATGTGGCGTCAAACGGAGCGATTCTCGAGGCCCTCGAGGGAGAAACAAAGCTCCACATCATCGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACACGCAATGATGACACTCCACATCTAAAACTCACAGTGGTGTCAACAACAACCATAGTGAAGTCTCTAATGAAGGAAATAGGGCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCCTTCGAGTTCAACCCCATAACAAATCTAAACCACTTAACCGACCTCACAAATGAAGCCCTCAAAGTAGAAGAAGACGAAGCCATTGCCATAAATTGCATTGGAGCCTTAAGAAGAGTGAGAGTTGAAGAGAGAAACAATGTGATTTCAATGTTGAAGTCACTAAAGCCTAGAGTTTTAACAATTGTAGAGGAAGAAGCTGATTTCATAAGCTCCAAAAATGACTTTTTGAAGTGCTTTGAAGAGTGCCTTAGATTCTACACTCTCTACTTTGAGATGTTGGAAGACAGCTTTGTGGCAACAAGCAATGAGAAATTGGCTTTAGAAAGAGAGTGTTCAAGAAGCATTGTGAGGCTTTTGGGGTGTGATGATGGAAGTGAAGGAGAAATAGTAGGGAGTGAAAGAAGAGAAAGGGGAAAGCAATGGAGCAAAAGGCTCAAAGAAGAAACTTTTTCATCAGCTGGATTTAGTGAAGATGTGATGGATGATGTTAAGGCTTTGCTCAAGAGATACAAACCCGGTTGGGCGCTGCTGCGTCGGCCTGTCATCGCCACCGATACCACCGGAGAAGAAGAAGAAGGTGGTGATGATTCAAGTGGAATTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAG 1365 46.08 MDITFFTAKEAPTSFFNQSHDHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSAAAANAAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCRATETGFSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVSTTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRVEERNNVISMLKSLKPRVLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEDSFVATSNEKLALERECSRSIVRLLGCDDGSEGEIVGSERRERGKQWSKRLKEETFSSAGFSEDVMDDVKALLKRYKPGWALLRRPVIATDTTGEEEEGGDDSSGIYLTWKEEPVVWVSAWKP 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24044318 24046320 + Tan0016945.1 Tan06g1555 756259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1555 454 ProSiteProfiles GRAS family profile. 55 453 IPR005202 -
Tan06g1555 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 452 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan06g1555 454 Pfam GRAS domain family 66 453 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1663 Tan-Chr5:46199895 Tan06g1555 Tan-Chr6:24044318 6.60E-108 dispersed
Tan06g0133 Tan-Chr6:1242771 Tan06g1555 Tan-Chr6:24044318 3.40E-31 dispersed
Tan06g1555 Tan-Chr6:24044318 Tan11g0122 Tan-Chr11:1245175 5.80E-37 dispersed
Tan06g1555 Tan-Chr6:24044318 Tan05g1662 Tan-Chr5:46198852 1.00E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27784 PF03514 GRAS 5.90E-93 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1555 K27743 - csv:101206730 750.74