Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1569 ATGGCGGACGAAGTTCAGAATGATCTCAACGATCAGGTGGCAGATATTGCCCCTTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTCGTACTTCAGGATCCGGCTGATGAATCTGTTGACAAGTTAGCAGAGAAAACTGAAAGTTTGTCAGTTTCTGATGGTTTAGAGACTACTACGTTTTCTGGACTTAAAAAGAAGAAGAAAAAGCCAGTAGAGGCCAGCTCCTTGAATGACGATGGTGCAGATGCCATAGAGGATTTGGAAGATCAAGCTGGGGAGAATGAGGAACAAGAGGGAATTGTTCTGCAGTATCGGTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAACATTCTTAGAGAGAATAATCCAGAGCTTGCCGGCGATAGGCGTAGAACAGTTATGAGGCCTCCACAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGGCAGCCAGACCATGTTATGGCTTTCTTATTGGCTGAACTGGGAACCAGTGGATCTCTTGATGGACAACAGAGATTAGTGGTTAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGTCGATATGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCAGACACTATCCTTTCAAAGGAGAATCGACTCTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGTTTTGTTGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 813 44.16 MADEVQNDLNDQVADIAPFDPTKKKKKKKVVLQDPADESVDKLAEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADAIEDLEDQAGENEEQEGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 270
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 24650086 24666490 - Tan0018538.1 Tan06g1569 756273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1569 270 MobiDBLite consensus disorder prediction 30 48 - -
Tan06g1569 270 MobiDBLite consensus disorder prediction 61 76 - -
Tan06g1569 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan06g1569 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 25 256 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Tan06g1569 270 Pfam Domain found in IF2B/IF5 139 248 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan06g1569 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan06g1569 270 MobiDBLite consensus disorder prediction 1 82 - -
Tan06g1569 270 FunFam Eukaryotic translation initiation factor 2 subunit 113 255 - -
Tan06g1569 270 Gene3D - 113 255 - -
Tan06g1569 270 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1569 Tan-Chr6:24650086 Tan08g2446 Tan-Chr8:75610801 8.50E-145 dispersed
Tan06g1569 Tan-Chr6:24650086 Tan06g1570 Tan-Chr6:24650086 2.30E-134 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1569 K03238 - csv:101220978 514.998