Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1621 ATGGGATCTTGCCTCTCTGGGGACCGCAACAATCGTACGATCGCTTATTCTGAGCTCGCTTCCACTTCTCGTGGTGATGGCGTTGTTACCCGAAGGAACTCCAAGAGGAAGATTACGAGAAAGGGTTCTTCTCCCTCTAGTGACTCTTCAAGGGAGATGTCGATTCATCGAGTTCCTGGCCGGATGTTTTTGAATGGATCAACTGAACATGCGACGCTTTTTACTAGGCAAGGCAAGAAAGGCATCAACCAGGACGCAATGATTGTCTGGGAGAATTTTGGTTCAAAAGAAGATACAATATTTTGCGGAGTCTTTGATGGACACGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTCAGAGATTCTCTTCCTCTAAAACTGAGTGCTCAGTGGGAATTGGATGCTACCAGAAATGAAGGGCAAAATGATGCGAGATGTCGAGTCTCTCCACCAACGCTGATCAACAATGACTCTGGAACCTCTGATTGTGATCTTGGTCACCAGAGCAGTTACAATGACATTTATGTCATGTTGAAAGAGTCTTTTCTAAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACACCCATACATTGATTGCTATACCAGTGGTACAACATCAGTTGCTTTGGTCAAACAGGGTCGGGATCTTATCATCGGAAATGTTGGGGACTCAAGGGCTGTATTAGGTACCAGAGATAAATCTAACTCTCTCATTGCAGTTCAGTTGACTGTGGACCTGAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTCAAAATGAGCCTCAAATTTTTCGGGTTTGGCTTCCCAACAGTGATTCTCCTGGTCTTGCCATGGCCAGAGCCTTCGGAGATTTCTGTTTAAAAGACTTTGGCTTGATAGCCGTTCCTGATGTTTCTTATTATCATCTTACTGAGAAAGATGAATTTGTGGTGCTGGCTACAGATGGGGTTTGGGATGTTCTCTCAAATGAAGAGGTTGTGGCAATTGTTGCATCTTCTCCAAGATCCTCCGCAGCTCGTAACCTTGTGGATTCGGCTACTCAAGCGTGGAGATTTAAGTACCCTACCACCAAGGTGGATGATTGTGCTGTAGTCTGCCTTTACCTGGACTCTAGTGAGAATGCTCTACAGTGA 1170 44.96 MGSCLSGDRNNRTIAYSELASTSRGDGVVTRRNSKRKITRKGSSPSSDSSREMSIHRVPGRMFLNGSTEHATLFTRQGKKGINQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLSAQWELDATRNEGQNDARCRVSPPTLINNDSGTSDCDLGHQSSYNDIYVMLKESFLKAFKVMDKELKLHPYIDCYTSGTTSVALVKQGRDLIIGNVGDSRAVLGTRDKSNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQNEPQIFRVWLPNSDSPGLAMARAFGDFCLKDFGLIAVPDVSYYHLTEKDEFVVLATDGVWDVLSNEEVVAIVASSPRSSAARNLVDSATQAWRFKYPTTKVDDCAVVCLYLDSSENALQ 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26746414 26751421 + Tan0007487.1 Tan06g1621 756325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1621 389 CDD PP2Cc 76 381 IPR001932 -
Tan06g1621 389 SUPERFAMILY PP2C-like 69 383 IPR036457 -
Tan06g1621 389 PANTHER PROTEIN PHOSPHATASE 57 379 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan06g1621 389 ProSiteProfiles PPM-type phosphatase domain profile. 70 381 IPR001932 -
Tan06g1621 389 SMART PP2C_4 59 379 IPR001932 -
Tan06g1621 389 Pfam Protein phosphatase 2C 84 359 IPR001932 -
Tan06g1621 389 MobiDBLite consensus disorder prediction 21 54 - -
Tan06g1621 389 Gene3D - 65 383 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0797 Tan-Chr5:6018331 Tan06g1621 Tan-Chr6:26746414 4.90E-108 dispersed
Tan06g1621 Tan-Chr6:26746414 Tan09g0621 Tan-Chr9:52973373 1.20E-131 dispersed
Tan06g1621 Tan-Chr6:26746414 Tan02g1435 Tan-Chr2:55688458 2.20E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1621 - - - 0.0