Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g1869 | ATGTCGTTGAGTAGTGAAATTGAAAGCCTCTGGGTTTTCGCCTTGGCTTCTAAATGCTCGGCTCTGACCCAAGAAAACATCCTTTACTCCTTACTCTTCCTTTTCTTAATTTGGTTTCTGGTTTCCATTTTCTATTGGGCCCATCCTGGCGGCCCTGCTTGGGGTCGCCATGGATGGTATCACCGTAATTCAACTATCTCCACTGCCGCCGCCGCCACCATCCCTGGTCCAAGAGGCCTCCCCGTCATCGGAAGCATGACCTTGATGACGGGACTGGCCCACCAACGAATCGCAGCGATGGCCAAATCCCTAGATGCCACTCGGCTGATGGCGTTCTCACTGGCAAACACTCGCGTGATAGTCACATGCAATCCAGATGTTGCAAAAGAGATTCTAAACAGCTCGGTGTTTGCGGACCGTCCGATCAAGGAATCGGCATACTCGTTGATGTTCAATCGCGCCATTGGATTTGCCCCTCATGGTGTCTATTGGCGGACCCTTCGGCGTATTGCTTCACAACACCTCTTCTGCCCCAAACAAATCAAATCCTCAGAGTTCCAACGCCGCCAAATCGCTTCCCAAATAGTCACAATGTTCTCCAACACGACGTCGCCCCACCAAGTTCGTGATACTCTGAAAAGAGCCTCTTTGAACCACATGATGGGATCGGTCTTCGGCCGGTTTTACAATCTCTCTGACTCCAATACCGAAGTGGACCAACTCAAGAACCTCGTGGACGAAGGCTACGATTTATTGGGCCTTCTCAATTGGTCCGACCATCTCCCCTTTTTGGCCGATTTCGACCCACAGAAAATCCGGTTCAGATGCTCCCGCTTGGTCCCCAAAGTGAACCGGTTTGTCGGCCGGATCCTCGCCGACCACCGGTCCAAATCAACCCAGCAAATCATGGATTTTGTGGACGTTCTTCTCTCTCTTCAGGAAACCGACAAACTCTCTGACTCCGATATGATCGCCGTGCTCTGGGAAATGATATTTAGAGGGACGGACACGGTGGCGGTTTTGATAGAGTGGATTCTAGCGAGGATGGTGGCTCATAAGGACGAGCAAGAAAAGGTACAAGAGGAACTGGATAAGGTCGTTGGTACATCACGAGGCGTCGTGGAATCTGACATTCCGTCGTTGGTTTATCTAACGGCGGTGGTTAAGGAAGTTCTCAGGTTGCACCCGCCGGGCCCACTTCTGTCGTGGGCCCGCATCGCCATCACCGATACTACCGTCGATGGCCATCACGTGCCTCGTGGGACCACTGCTATGGTGAACATGTGGTCGATAGCGCGGGACCCACAGGTTTGGTTCAACCCACTCGAATTTATCCCCCAGAGGTTTGTGCTCGGTTCTAGCGCTGGTGCTGCTGACATGGAGTTTTCAGTTATGGGTTCGGATCTACGGTTGGCTCCGTTCGGGTCGGGTCGTAGGACTTGCCCTGGGAAGGCACTCGCTTGGACAACTGTCACTTTTTGGGTGGCTACTCTCTTACACGAGTTTAAATGGTTGCCTTCGTCGGATCAAAACGACGCCGTCGACTTCTCTGAAGATCTCAAGCTTTCTTGTGAGATGGCCAATCCACTCACTGTTAAACTATGCCCAAGGCGCTAA | 1617 | 52.13 | MSLSSEIESLWVFALASKCSALTQENILYSLLFLFLIWFLVSIFYWAHPGGPAWGRHGWYHRNSTISTAAAATIPGPRGLPVIGSMTLMTGLAHQRIAAMAKSLDATRLMAFSLANTRVIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPHGVYWRTLRRIASQHLFCPKQIKSSEFQRRQIASQIVTMFSNTTSPHQVRDTLKRASLNHMMGSVFGRFYNLSDSNTEVDQLKNLVDEGYDLLGLLNWSDHLPFLADFDPQKIRFRCSRLVPKVNRFVGRILADHRSKSTQQIMDFVDVLLSLQETDKLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMVAHKDEQEKVQEELDKVVGTSRGVVESDIPSLVYLTAVVKEVLRLHPPGPLLSWARIAITDTTVDGHHVPRGTTAMVNMWSIARDPQVWFNPLEFIPQRFVLGSSAGAADMEFSVMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSSDQNDAVDFSEDLKLSCEMANPLTVKLCPRR | 538 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 48239787 | 48241878 | - | Tan0003874.1 | Tan06g1869 | 756573 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g1869 | 538 | PANTHER | CYTOCHROME P450 78A7-RELATED | 5 | 533 | IPR051996 | - | |
| Tan06g1869 | 538 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | P450 superfamily signature | 472 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | P450 superfamily signature | 481 | 492 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | Pfam | Cytochrome P450 | 75 | 511 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | CDD | CYP78 | 106 | 530 | - | - | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 385 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 427 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | Gene3D | Cytochrome P450 | 62 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan06g1869 | 538 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 474 | 483 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan06g1869 | 538 | FunFam | Cytochrome P450 78A5 | 66 | 537 | - | - | |
| Tan06g1869 | 538 | SUPERFAMILY | Cytochrome P450 | 74 | 537 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g2343 | Tan-Chr5:74875006 | Tan06g1869 | Tan-Chr6:48239787 | 1.10E-135 | dispersed | |
| Tan06g1869 | Tan-Chr6:48239787 | Tan07g0941 | Tan-Chr7:19799019 | 2.40E-130 | dispersed | |
| Tan06g1869 | Tan-Chr6:48239787 | Tan08g1279 | Tan-Chr8:42694608 | 5.20E-61 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g1869 | K20619 | - | csv:101216159 | 863.218 |