Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1971 ATGGAGTCCGGTTCTTTTGATCAAAACATCAGGGGAGTGCCCACCCATGGCGGTCGATACATTCAATACAATGTCCATGGGAATCTATTTGAAGTTTCTAGGAAGTATATTCCACCTATAAAGCCAGTTGGGAGAGGAGCTTATGGTATTGTCTGTGCTGCTTTGAATTCAGAAACAAATGAGGAGGTTGCAATTAAGAAGGTTGGCAATGCATTTGACAATAGGATTGATGCTAAAAGAACCTTGCGAGAAATCAAGCTTCTTCGACACATGGATCATGAAAATATTATTGCTCTTAAAGATATTATAAGACCTCCTCAGAAGGAGAATTTCAATGATGTGTACCTTGTTTATGAATTGATGGATACTGATCTAAATCAGATAATACGGTCCAACCAATCGTTGACTGATGATCATTGCCGGTACTTTCTGTACCAGCTGTTACGAGGGCTAAAATATGTGCATTCTGCTAATGTTCTACACCGTGATCTAAAACCAAGCAATTTGTTCCTCAATGCAAACTGTGACCTAAAAATTGGAGACTTTGGACTTGCAAGGACAACTTCTGAAACTGATTTTATGACCGAGTATGTTGTTACTCGGTGGTATCGTGCACCGGAATTGCTTCTTAATTGTTCAGAATACACTGGAGCAATAGATATTTGGTCTGTTGGCTGTATACTTGGTGAAATTATGCACAGACAACCACTGTTTCCTGGAAAAGATTATGTCCATCAGCTAAAACTTATTACTGAGCTCATTGGGTCACCTGATGACTCGAGCCTCGGATTCTTACGTAGTGACAATCCACGAAGATATTTTAGACATCTTCCTCACTTCCCCAAGCAACATTTTTCCACTAGATTTCCCACCATGTCTCCTGCAGCTATTGACTTGCTGGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGTTGACGAGGCACTGTGCCATCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCAGTATGTCCGAGGCCTTTCAGTTTTGATTTCGAGCAACCGTCGTATACTGAAGAAAACATCAAGGAACTTGTATGGAGAGAATCTGTGAAGTTCAACCCAGATCCCGCTTATTGA 1113 41.06 MESGSFDQNIRGVPTHGGRYIQYNVHGNLFEVSRKYIPPIKPVGRGAYGIVCAALNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIIALKDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRQPLFPGKDYVHQLKLITELIGSPDDSSLGFLRSDNPRRYFRHLPHFPKQHFSTRFPTMSPAAIDLLEKMLVFDPTKRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPSYTEENIKELVWRESVKFNPDPAY 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 62495526 62500986 - Tan0020906.1 Tan06g1971 756675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1971 370 Pfam Protein kinase domain 41 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1971 370 SMART serkin_6 37 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1971 370 ProSiteProfiles Protein kinase domain profile. 37 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1971 370 CDD STKc_TEY_MAPK 30 366 - -
Tan06g1971 370 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524(InterPro)
Tan06g1971 370 FunFam Mitogen-activated protein kinase 121 350 - -
Tan06g1971 370 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1971 370 Gene3D Phosphorylase Kinase; domain 1 20 360 - -
Tan06g1971 370 SUPERFAMILY Protein kinase-like (PK-like) 40 330 IPR011009 -
Tan06g1971 370 Gene3D Transferase(Phosphotransferase) domain 1 121 350 - -
Tan06g1971 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1971 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 359 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan06g1971 370 FunFam Mitogen-activated protein kinase 22 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2545 Tan-Chr1:36574048 Tan06g1971 Tan-Chr6:62495526 2.00E-168 dispersed
Tan02g2001 Tan-Chr2:89172052 Tan06g1971 Tan-Chr6:62495526 5.30E-116 dispersed
Tan02g2236 Tan-Chr2:91350240 Tan06g1971 Tan-Chr6:62495526 1.60E-160 dispersed
Tan06g1971 Tan-Chr6:62495526 Tan06g1974 Tan-Chr6:62495526 1.50E-224 dispersed
Tan11g2116 Tan-Chr11:50229547 Tan06g1971 Tan-Chr6:62495526 1.30E-41 dispersed
Tan06g1971 Tan-Chr6:62495526 Tan06g1972 Tan-Chr6:62495526 1.50E-224 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67797 PF00069 Pkinase 4.80E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1971 K20600 - csv:101215189 731.865