Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1973 ATGGAGTCCGGTTCTTTTGATCAAAACATCAGGGGAGTGCCCACCCATGGCGGTCGATACATTCAATACAATGTCCATGGGAATCTATTTGAAGTTTCTAGGAAGTATATTCCACCTATAAAGCCAGTTGGGAGAGGAGCTTATGGTATTGTCTGTGCTGCTTTGAATTCAGAAACAAATGAGGAGGTTGCAATTAAGAAGGTTGGCAATGCATTTGACAATAGGATTGATGCTAAAAGAACCTTGCGAGAAATCAAGCTTCTTCGACACATGGATCATGAAAATATTATTGCTCTTAAAGATATTATAAGACCTCCTCAGAAGGAGAATTTCAATGATGTGTACCTTGTTTATGAATTGATGGATACTGATCTAAATCAGATAATACGGTCCAACCAATCGTTGACTGATGATCATTGCCGGTACTTTCTGTACCAGCTGTTACGAGGGCTAAAATATGTGCATTCTGCTAATGTTCTACACCGTGATCTAAAACCAAGCAATTTGTTCCTCAATGCAAACTGTGACCTAAAAATTGGAGACTTTGGACTTGCAAGGACAACTTCTGAAACTGATTTTATGACCGAGTATGTTGTTACTCGGTGGTATCGTGCACCGGAATTGCTTCTTAATTGTTCAGAATACACTGGAGCAATAGATATTTGGTCTGTTGGCTGTATACTTGGTGAAATTATGCACAGACAACCACTGTTTCCTGGAAAAGATTATGTCCATCAGCTAAAACTTATTACTGAGCTCATTGGGTCACCTGATGACTCGAGCCTCGGATTCTTACGTAGTGACAATCCACGAAGATATTTTAGACATCTTCCTCACTTCCCCAAGCAACATTTTTCCACTAGATTTCCCACCATGTCTCCTGCAGCTATTGACTTGCTGGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGGTATAATTCGACCCGGTGATGAATAA 966 40.27 MESGSFDQNIRGVPTHGGRYIQYNVHGNLFEVSRKYIPPIKPVGRGAYGIVCAALNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIIALKDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRQPLFPGKDYVHQLKLITELIGSPDDSSLGFLRSDNPRRYFRHLPHFPKQHFSTRFPTMSPAAIDLLEKMLVFDPTKRITGIIRPGDE 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 62495526 62500986 - Tan0020906.3 Tan06g1973 756677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1973 321 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 30 313 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan06g1973 321 Pfam Protein kinase domain 41 313 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1973 321 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524(InterPro)
Tan06g1973 321 ProSiteProfiles Protein kinase domain profile. 37 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1973 321 FunFam Mitogen-activated protein kinase 121 315 - -
Tan06g1973 321 Gene3D Phosphorylase Kinase; domain 1 20 120 - -
Tan06g1973 321 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1973 321 SMART serkin_6 37 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1973 321 SUPERFAMILY Protein kinase-like (PK-like) 40 313 IPR011009 -
Tan06g1973 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1973 321 FunFam Mitogen-activated protein kinase 22 131 - -
Tan06g1973 321 Gene3D Transferase(Phosphotransferase) domain 1 121 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1973 Tan-Chr6:62495526 Tan06g1975 Tan-Chr6:62495526 1.30E-192 dispersed
Tan06g1972 Tan-Chr6:62495526 Tan06g1973 Tan-Chr6:62495526 2.50E-187 tandem
Tan06g1973 Tan-Chr6:62495526 Tan06g1974 Tan-Chr6:62495526 2.10E-187 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67799 PF00069 Pkinase 2.20E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1973 K20600 - csv:101215189 615.535