Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1998 ATGGATCATGAAAATATTATTGCTCTTAAAGATATTATAAGACCTCCTCAGAAGGAGAATTTCAATGATGTATACCTTGTTTATGACTTGATGGATGCTGATCTAAATCAGATAATACGGTTAAACCAATCGTTGACTGATTATCATTGCCAGTACTTTCTGTACCAGTTGTTACGAGGGCTAAAGTACGTGCATTCTGCTAATGTTCTACACCGTGATCTAAAACCAAGCAATTTGTTCCTCAATGCAAACTGTGACCTAAAAATTGGAGACTTTGGACTTGCAAGGACAACTTCTGAAACTGATTTTATGACCGAGTATGTTGTTACTCGGTGGTATCGTGCACCGGAATTGCTTCTTAATTGTTCAGAATACACTGGAGCAATAGATATTTGGTCTGTTGGCTGTATACTTGGTGAAATTATGCACAGGCAACCACTGTTTCCTGGAAAAGATTATGTCCATCAGCTAAAACTTATTACTGAGCTCATTGGGTCACCTGACGACTCGAGCCTTGGATTTTTACGTAGTGACAATCCACGAAGATATTTTAGACATCTTCCTCACTTCCCCAAGCAACATTTTCCCACTAGATTTCCCACCATGTCTCCTGCTGCTATTGACTTGCTGGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGTTGACGAGGCACTGTGCCATCCATACTTGGCACCTCTTCATGATATCAACAAGGAGCCAGTCTGTCCGAGGCCTTTCAGTTTTGATTTCGAGCAAACGTCGTATACTGAAGAAAACATCAAGGAACTTGTCTGGAGAGAATCTGTGAAGTTCAACCCGGATCCTGCTTATTGA 843 40.81 MDHENIIALKDIIRPPQKENFNDVYLVYDLMDADLNQIIRLNQSLTDYHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRQPLFPGKDYVHQLKLITELIGSPDDSSLGFLRSDNPRRYFRHLPHFPKQHFPTRFPTMSPAAIDLLEKMLVFDPTKRITVDEALCHPYLAPLHDINKEPVCPRPFSFDFEQTSYTEENIKELVWRESVKFNPDPAY 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 63993402 64004205 + Tan0006427.2 Tan06g1998 756702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1998 280 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1998 280 Pfam Protein kinase domain 1 233 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1998 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1998 280 Gene3D Phosphorylase Kinase; domain 1 1 270 - -
Tan06g1998 280 SMART serkin_6 2 233 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1998 280 SUPERFAMILY Protein kinase-like (PK-like) 2 239 IPR011009 -
Tan06g1998 280 Gene3D Transferase(Phosphotransferase) domain 1 31 260 - -
Tan06g1998 280 FunFam Mitogen-activated protein kinase 31 260 - -
Tan06g1998 280 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 269 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1998 Tan-Chr6:63993402 Tan07g1607 Tan-Chr7:67447195 2.50E-139 dispersed
Tan06g1997 Tan-Chr6:63993402 Tan06g1998 Tan-Chr6:63993402 2.30E-169 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67804 PF00069 Pkinase 1.10E-54 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1998 K20600 - csv:101215189 553.132