Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2003 ATGGCTTCTCTGGTTAGAAAGCAAGCTAAGAATGGCTGCTTTCTCCTCCTCCTCCTCTTCCTATCTCTTCCATATGTCTCAATGGCCGTCTCAGAAGCGGAAGCTTTGTATCTGAGGGGTCGCCAACTTTTGGCTCTGAAAGAACATGAAGAACTCCCAGATGACTATAAATATGAACTTGACATTGCTGACACATTTCCAAATGAGAGGTTGAAGAAGGCTTATATTGGGCTTCAAGCTTGGAAATTGGCCCTTTATTCTGACCCTCATAACATGACAGCCAATTGGGTTGGTGCGGATGTGTGCTCTTACACAGGCGTTTTTTGTACTGCCGCGCTTGATGACTCCAATGTGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCTGGCTACTTGCCTCCAGAGCTTGGCCTCTTGACCGATTTGGCTTTGTTCCATATCAATTCTAATAGGTTTTGTGGTATCATTCCTTCTAGCTTCTCTAAGCTCACTCTCATGTTTGAGTTTGATGTCAGTAACAACCGCTTCGTTGGCCATTTCCCTGAGGTTGTCCTTAAATGGCCCATCGCTAAGTTCCTCGATCTTAGGTACAACGACTTCGAAGGAGAACTTCCGCCTTCACTCTTCACCAAAACCTTCGACGCCATATTCTTAAACAACAACAGATTCAACTCTCTCATCCCCGACACCATCGGACACTCCACCGTCTCCCTTGTGTCCTTCGCCAACAACGAGTTCCATGGCTGCATTCCCAGCACCATCGGCCAAATGGCCAGCCTCAACCAGATCCTCTTCCTCGGTAACAAGCTTGGCGGCTGTCTCCCACCGGAGATCGGAAACCTCGTCAATCTCACCGTCTTCGATGTCAGCTCCAATACCTTCGTCGGCAACTTGCCCACATCCTTCTCCTCCCTCAACAACTTGGAGATTCTCGACGTTAGTAGCAATGAATTCAGGGGTTCTGTTTCTGGAGGGCTATGCAAAATGCCTAAATTGGAAAACTTTACTTTCTCCTTTAATTTTTTTGATCGGGAAGATTCTGAGTGTGTTGCATCTAAAGGATCCGACAAGATTTTTGATGATGCTCAGAATTGTTTGGCGAATCGCCCCGAGCAGAGAGATTCTGACAAATGTAGCTCTGTTCTTAAGAAATCCGTGGATTGTGGAAGCTGCGGTGGCGGTTTTCCCGGCGCGCCCATGACTCCTGATGATCCATATGATCAATCTCCGGACCCGAGACATAGGTCACCACCACCTCCGATCACCTATCCACCGGAAACTGTTGACGCCTCTGTCCCACCATCGCCGTTTGAGTCCTCACCGCCTACATCTCACTCTCCACCGTCGCCGACTCAATCCTACCCACCATCCTCTGTTCCATCCTCTCCACCGTCCTCAGTTCCTTCGTCCCCACAATCCTCCGTTCCGTCTTCACCACCGTCCTCCGTTCCGTCCTCACCGCCGTCCTCCGTTCCGTCCTCACCCCCTACCGTCCAATCCCCGCCAACCCCGGTTCAGTCTCCCCCACCACCGGTTCAGTCTCCCCCACCACCGGTTCAGTCTCCACCTCCACCCGTTCACTCTCCACCTCCACCGGTTTACTCCCCTCCACCACCGGTTCACTCCCCACCTCCACCCGTGTACTCTCCTCCACCACCAGTGCACTCCCCTCCACCACCGGTCTACTCCCCACCTCCACCGGTCCACTCTCCTCCACCTCCAGTACACTCCCCGCCCCCTCCGGTCCACTCTCCTCCACCACCGGTGCAGTCCCCACCACCTCCAGTGCACTCCCCACCTCCACCGGTTCATTCCCCACCACCCCCTGTCCATTCTCCACCACCACCGGTTTATTCCCCACCACCTCCCGTCTACTCCCCTCCCCCACCGGTCTACTCCCCACCACCACCGGTTCATTCCCCACCCCCACCGGTTTACTCACCACCACCCCCCGTCCACTCTCCGCCACCCCCCGTCTACTCTCCACCACCACCGGTCTTTTCCCCACCCCCACCGGTCCACTCTCCACCGCCACCAGTCCAATCCCCACCACCCCCGTCTACTCTCCACCACCACCCCCTGTTTACTCCCCACCACCACCAGTCCAATCTCCACCACCTCCGACTGCATTTCCTCCTCCTCCTCCCGGTGCTTCTCCACCGCCGGCCTTCGAAGACATCATCCTCCCACCAAATATCGGTTTCCAATACGCATCGCCGCCTCCACCACAGTTCCCCGGCTACTAACTATGTATTTCACACACATTAG 2277 54.28 MASLVRKQAKNGCFLLLLLFLSLPYVSMAVSEAEALYLRGRQLLALKEHEELPDDYKYELDIADTFPNERLKKAYIGLQAWKLALYSDPHNMTANWVGADVCSYTGVFCTAALDDSNVEVVAGIDLNHGDIAGYLPPELGLLTDLALFHINSNRFCGIIPSSFSKLTLMFEFDVSNNRFVGHFPEVVLKWPIAKFLDLRYNDFEGELPPSLFTKTFDAIFLNNNRFNSLIPDTIGHSTVSLVSFANNEFHGCIPSTIGQMASLNQILFLGNKLGGCLPPEIGNLVNLTVFDVSSNTFVGNLPTSFSSLNNLEILDVSSNEFRGSVSGGLCKMPKLENFTFSFNFFDREDSECVASKGSDKIFDDAQNCLANRPEQRDSDKCSSVLKKSVDCGSCGGGFPGAPMTPDDPYDQSPDPRHRSPPPPITYPPETVDASVPPSPFESSPPTSHSPPSPTQSYPPSSVPSSPPSSVPSSPQSSVPSSPPSSVPSSPPSSVPSSPPTVQSPPTPVQSPPPPVQSPPPPVQSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVYSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVFSPPPPVHSPPPPVQSPPPPSTLHHHPLFTPHHHQSNLHHLRLHFLLLLPVLLHRRPSKTSSSHQISVSNTHRRLHHSSPATNYVFHTH 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 64911250 64913609 - Tan0016173.1 Tan06g2003 756707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2003 758 Pfam Leucine rich repeat N-terminal domain 78 110 IPR013210 -
Tan06g2003 758 FunFam Leucine-rich repeat receptor protein kinase EMS1 234 328 - -
Tan06g2003 758 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515(InterPro)
Tan06g2003 758 Pfam Leucine Rich Repeat 286 308 IPR001611 GO:0005515(InterPro)
Tan06g2003 758 SUPERFAMILY L domain-like 84 347 - -
Tan06g2003 758 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 648 IPR051582 -
Tan06g2003 758 Gene3D Ribonuclease Inhibitor 76 242 IPR032675 -
Tan06g2003 758 FunFam Leucine-rich repeat extensin-like protein 1 75 233 - -
Tan06g2003 758 MobiDBLite consensus disorder prediction 415 694 - -
Tan06g2003 758 MobiDBLite consensus disorder prediction 398 702 - -
Tan06g2003 758 Gene3D Ribonuclease Inhibitor 243 386 IPR032675 -
Tan06g2003 758 MobiDBLite consensus disorder prediction 729 758 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4848 Tan-Chr1:114211412 Tan06g2003 Tan-Chr6:64911250 6.40E-54 dispersed
Tan06g2003 Tan-Chr6:64911250 Tan08g0179 Tan-Chr8:1557380 2.50E-37 dispersed
Tan06g2003 Tan-Chr6:64911250 Tan09g1311 Tan-Chr9:65422738 1.70E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2003 - - - 0.0