Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2024 ATGTCTAAAGAAGAAAGCCCAAAAGCTAACAGAAGGACAACCCGGTCCTCTTCAGCGGTTGTTTTAAGGGATTCTGGTGACACAAAGAAGATATGTGATCCACACATTCCAACTTTTAATGATCTGGTTTTTGGAGAAGATACCATTAGTAAGGAAGATCTCTTATCTAGTTTTCCTGGACGTCGTACTCAAATACTTGAACTCCTTAACCTTTTGGGACCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGGGCATCTTCTGGGAAAACCAGTGTCATTCTACAGATATTCCGCCATCTCAACCGTCCTTTTGTCTATTCAAGCTGTCGTACTTGTTATAGTTTACGAACTCTATTTGAGTCGATCCTGAATCAGTTATTACTTCATCAAAAAGATGCAGACAATGGATATTTGAGTGCAAAGCGCTGTGAAAAGCCATCAGATTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTAAAAACTCTCCAGGGGAACCTAGGAAAGTTAAGCACTAAGAAGTTAACAGGACAAGGGCATGGACACATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAACGTATTGCCGTTTCTGTTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCGGACACATACTATTCAAATATGGGTTACTTGGACCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCATCAAATTTTTATGAGCAATCAAACCAATCAAGAGATGTATTCGTCCTTTCTGAATGTTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGCTGTCCATAGCCTTTTCATCATTGTATAAAACATACCGTGATGCTTCAGGCCATATGAATATTGTTCCCAATGAGTCCAGCAAGAGGACATGGTTCATTGATTTTCAGCCACATATTGCTCCTGCTTTGAATCAGATATTTAAAATTTCATCTCAGCCTTCTGAAGGTAATAATTTGAAGGAACCAAAGAGAAAAGGTGGTAGTAAGAAGTTTGGTGGGTTGGACTCTTCTGAGCACTTGGACTTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTATTTGATTCAACTGGGGGCTCTAGTAGTCGAAAAAGGAAGAAGAGGCCATCTGAAAAATCAATCGAGCAGAAGGAAATTTCAGAACAGGAGTTACTTATGAAAGGACCTGGAACTTTTCCACTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAACCTCATTTGAAGATGAGCAAGGAAATGTTGACATGGAAAGTCAAAATGAGGATAGCGAACTCATGTCTGATGTTCTCTTGCAACTTTCCAGCCTCTGCAATGCAAATTTTGTGGTCAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACCGTGTCTGAAGATATGGCTTTGAAGGTAGCAAGGAGTATTAAGTTTCCCCTGTCCAAGTACATGTACAGAAGATAA 1611 39.85 MSKEESPKANRRTTRSSSAVVLRDSGDTKKICDPHIPTFNDLVFGEDTISKEDLLSSFPGRRTQILELLNLLGPLNSPMLPLFVYGGASSGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFESILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNLGKLSTKKLTGQGHGHMIYLIFDNLELVRDWDKSSNVLPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLDPIPVYFSEYTEDDLHQIFMSNQTNQEMYSSFLNVVLGPFYRITRQVNELSIAFSSLYKTYRDASGHMNIVPNESSKRTWFIDFQPHIAPALNQIFKISSQPSEGNNLKEPKRKGGSKKFGGLDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGSSSRKRKKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAETSFEDEQGNVDMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKYMYRR 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 65657164 65662435 + Tan0021215.2 Tan06g2024 756728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2024 536 Gene3D - 58 238 IPR027417 -
Tan06g2024 536 MobiDBLite consensus disorder prediction 1 21 - -
Tan06g2024 536 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 376 533 IPR047088 -
Tan06g2024 536 Pfam AAA ATPase domain 58 217 IPR041664 -
Tan06g2024 536 MobiDBLite consensus disorder prediction 343 364 - -
Tan06g2024 536 MobiDBLite consensus disorder prediction 408 430 - -
Tan06g2024 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 287 IPR027417 -
Tan06g2024 536 MobiDBLite consensus disorder prediction 350 364 - -
Tan06g2024 536 MobiDBLite consensus disorder prediction 400 430 - -
Tan06g2024 536 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 50 535 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Tan06g2024 536 FunFam Origin of replication complex subunit 5 58 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2024 Tan-Chr6:65657164 Tan06g2026 Tan-Chr6:65657164 2.00E-307 dispersed
Tan06g2023 Tan-Chr6:65657164 Tan06g2024 Tan-Chr6:65657164 2.00E-307 tandem
Tan06g2024 Tan-Chr6:65657164 Tan06g2025 Tan-Chr6:65657164 2.00E-307 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2024 K02607 - csv:101223023 927.161