Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2129 ATGTCCCATCTTCCCTCTTTGTGGGTCCAATCTCCCTTTTCCATTTCCACATTATTATTAATCACCCCCATTTTCCCATCTTTTTCCATTTTCCACCCCCTTTATATACCTTATTCCATTTCTTACCCTAAATCCCCTGTTCTCACTTCTTGCTCTCCTTCCTTTCTTCTTCTTCCTCCTCTCTCCGATTTCCGTCCTCTGACCATGGCAGATATACAGAAACAAGAACTTGACGACGATGATGACTCTCGGGCCACCGACCTTCGGATCAATGACTCCGACACCTCTCGAATTGACCTTCTTGCCCTTGCTCCCAAGCAGGAGCATCCCGACTCCGATGACTCCAAGCTCCCGCCGTCCGAAATTCAGGTCGTCAAGTTCACGGCGGATATTGCTAAAACGGTGTCAGCTCTCACGCCGAAGAGGGCGTCCACAAAGGATCGTCACACCAAAGTCGAGGGCCGCGGCCGGAGGATTCGGATTCCGGCCACCTGTGCGGCTCGTATCTTTCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACTATCCGGTGGCTTCTCGAGCGTGCCGAGCCGGCGATCATTGCCGCTACTGGGACTGGTACCATTCCCGCCATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCTTCTTCTTACCAAGATTCCACCGACCAATCCGCCGGTAAGAAGCGGCGTAAACGCCCCGCTAATAGTGATTACGTTGACGTCAACGACGCCGTTTCCGTCTCCGTCTCCAACGGCGTCGTCCACGCCGGTACCGCTACCACCGCCGCCGTGCAACAGGCTTTTCCGCCGGGATTCGTTCCGGTGTGGGCCATCCCATCAAACGCCATAATTCCCGGGGCGGTTTTCATGGTTCCATCCGTGGCGTGCTCTTCCACCCGTCCGCAGTTGTTTTCATTTCCGGCTCCGGCGGCGCAGCTTATCAACACGACGGCACGGCCCATTTCCACCGTCCCGTCGAAGCCGGACACATCTCACATTCAGTCGAGCCCCACCAATCAAAGCTCGAGCACTTCGAGTTCTACCGCTTCCAAATCTCAATCCGTCATGGCGCCGATCTCGAGCTCCACCGTTCCGACGACCAGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATGCGATAAGGAAGAGCTTCAATTCATGTCTCGCTCCTCCTCAAAACATTGA 1224 54.58 MSHLPSLWVQSPFSISTLLLITPIFPSFSIFHPLYIPYSISYPKSPVLTSCSPSFLLLPPLSDFRPLTMADIQKQELDDDDDSRATDLRINDSDTSRIDLLALAPKQEHPDSDDSKLPPSEIQVVKFTADIAKTVSALTPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSYQDSTDQSAGKKRRKRPANSDYVDVNDAVSVSVSNGVVHAGTATTAAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAQLINTTARPISTVPSKPDTSHIQSSPTNQSSSTSSSTASKSQSVMAPISSSTVPTTSKTTTQMLRDFSLEICDKEELQFMSRSSSKH 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 70499293 70501537 + Tan0022158.1 Tan06g2129 756833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2129 407 MobiDBLite consensus disorder prediction 232 246 - -
Tan06g2129 407 MobiDBLite consensus disorder prediction 329 379 - -
Tan06g2129 407 ProSiteProfiles TCP domain profile. 145 199 IPR017887 -
Tan06g2129 407 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 123 351 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Tan06g2129 407 MobiDBLite consensus disorder prediction 219 246 - -
Tan06g2129 407 Pfam TCP family transcription factor 144 242 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0307 Tan-Chr1:2601870 Tan06g2129 Tan-Chr6:70499293 6.60E-49 dispersed
Tan06g2129 Tan-Chr6:70499293 Tan07g0081 Tan-Chr7:2962588 2.30E-29 dispersed
Tan06g2129 Tan-Chr6:70499293 Tan05g3331 Tan-Chr5:85117847 2.30E-29 transposed
Tan06g2129 Tan-Chr6:70499293 Tan07g0080 Tan-Chr7:2962588 2.30E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27808 PF03634 TCP 8.70E-30 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2129 - - - 0.0