Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2133 ATGGATAATTACGGTTCTTCACCTTCATATCCATACCACAATCCATATGCATACCCTCGTGCAGCTCCTCCTCAATACCCACCTCCTCAATATCCACCTCCTTCTCAATATCCACCTCCTCATTATGCACATCCAAATTCAGATCCATATGCTCGTCCTTCTTACCCTTACCCGTATAATCCTTCACATGCCTCTCCATTTGCTTATCCCCCAATCCCATCCCATTCTGGCTTAGTTGAGTATATTCAACATCCACCTCCACATTCTGGCCAAGTACCTTACCCTTATCCTTACTCTGATACCTCATCTACTAATGGTAGTGCTAGGCCATCCATTCAATATCATAACAATTTCCAACCTGGTACATCCCCATATCGGTATCAAGAATCTAATGCATACCCTCCATCAGAAACTCAATACCCACCACCCCCTTCACGAGTAAATAGCTTCTCTGGCCACTACAGGAATGATAGCACTGATTCCGTCTCTTCTCTCTCTTCTGCTTATCCGCCTATAGATGACCTTTTGTGCAATGTACATTTGTCTGATCATCAACCAACTGCCCCTGCATCACCTCCTGCACCTGCTGCAGCACCTGTATCTATACAACCTTCAGCTTCGTTATTGGCAAATTCACCTCAAAGTGCAAGATATGATCGGCGTGACCGATTTTATGGCTTTCCGAATTCATCCTTTTCTAGTTTTGACACGGGGAATTCAGATCAAATGACTTCATCCAAGCAACCTTCATTTTCCCATTCAAGCTCATTCAGTGGGTCTCAACATGGTCAGAACTTACAGATTGTTCCATTGCACAATAAAGCATCATTGAAAGTTTTGCTGTTACATGGAAACTTAGAAATATGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTTGCAAAATTACCTGGCAAAATTGAAGGGCGCGTGAGTCATAAGATCACTAGTGACCCTTATGTATCGATCTCTGTAACAAATGCAATAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAATCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATTATGCTGCTGAAGTAGTATTTTTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTAGCAATTCCTGCAGAACAAATATATTCAGGGTCTATAGTTGAGGGAACCTTCCCAATCCTACATAGTGGGAAGCCATGTAAGCCTGGAGCTGCTCTAAACATTTCTATTCAATATACCCCAATGGAGAGGCTTAGTACTTATCATCATGGAGTGGGAGCTGGCCCTGATTATCAGGGAGTTCCTGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTCACTCTTTATCAAGATGCTCATGTTCCAGATGGTCACCTTCCAAATTTGAAGCTTGATAATGGTATGTACTATGTACATGGGAAGTGTTGGCATGACATCTTTGATGCCGTACGTCAGGCTCGCAGGTTAATCTACATAACTGGGTGGTCAGTGTGGCACAAAGTGAAACTAGTTCGAGATACTGGCTATGGGACAGAGTGTACCCTTGGAGATCTCCTAAGGTCCAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGATGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAAGTGATACTTTGTCCTCGCATGGCTGGAAAACGACATAGCTGGGTTAAGCAAAAGGAAGTTGGAACTATTTATACCCACCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAAATCATAGCTTTTGTTGGAGGACTCGATTTATGTGATGGGCGGTATGATACTCCATCACATCCCATATTTCGGACACTTCAAACAGTACACAAGGATGATTACCACAATCCTACTTACACGGGTAGTGTTGTTGGTTGTCCAAGAGAACCGTGGCATGATCTGCACAGTAAAATTGATGGTCCAGCAGCATATGATGTTTTGACGAACTTTGAGGAGCGATGGAGGAGGGCTTCAAAACCTCACGGGATAAAGAAGTTGAAATCATATGATGATGCTTTGCTGCGCATTGAAAGAATTCATGACATAATTGGAATTTCTGAATCTTACTGCACTAACGAAAATGACCCTGAATCATGGCATGTGCAGATTTTTCGCTCAATTGATTCAAATTCTGTTAAAGATTTCCCAAAGGATCCAAAAGATGCCCCAAGCAAGAACCTTGTATGTGGAAAGAACGTGCTGATTGACATGAGTATACACACAGCCTATGTGAAAGCCATTCGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTCATTGGGTCATCCTTCAATTGGAATTCAAACAAAGATATAGGTGCCAACAATTTGATTCCAATGGAAATTGCACTAAAGATTGCTGATAAAATCAGAGCAAATGAGAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCCGAGGGCGTTCCAACTGCTGCTGCCACTCAGAGGATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAAGTCATTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGATGCATTCTCTCCTCAAGACTATTTGAACTTTTTCTGCCTGGGAAATCGTGAGGCTATGGATGGAAATGATCCTTCATGTTCTGGAAGTCCTAATGCAGAAAACACCCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGATGACGAGTATGTGATTTTGGGATCTGCTAACATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCTCATTATACATGGGCAAGGAAACTTTCACATCCTCGTGGACAGATCTACGGATATCGGATGTCGTTGTGGGCGGAGCATACAGGAACCGTCGAAGACTGTTTCAACCAACCAGAGAGCCTGGAATGCGTGAAAAGAGTTAGAACAATGGGAGAATTAAACTGGAAACAATTTGCTGGAGATGATGTAACAGAGATGAGAGGACACCTTCTGAAGTACCCTGTTGAAGTTGATAGAAGAGGGAGAGTAAGATCTCTACCTGGACATGAAAATTTTCCAGATGTAGGAGGAAGAATAGTTGGTTCATTTCTTGGCATTCAGGAGAACCTCACTATCTAA 3276 42.34 MDNYGSSPSYPYHNPYAYPRAAPPQYPPPQYPPPSQYPPPHYAHPNSDPYARPSYPYPYNPSHASPFAYPPIPSHSGLVEYIQHPPPHSGQVPYPYPYSDTSSTNGSARPSIQYHNNFQPGTSPYRYQESNAYPPSETQYPPPPSRVNSFSGHYRNDSTDSVSSLSSAYPPIDDLLCNVHLSDHQPTAPASPPAPAAAPVSIQPSASLLANSPQSARYDRRDRFYGFPNSSFSSFDTGNSDQMTSSKQPSFSHSSSFSGSQHGQNLQIVPLHNKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKLPGKIEGRVSHKITSDPYVSISVTNAIIGRTFVISNNENPVWRQHFYVPVAHYAAEVVFFVKDSDVVGSQLIGTVAIPAEQIYSGSIVEGTFPILHSGKPCKPGAALNISIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLKLDNGMYYVHGKCWHDIFDAVRQARRLIYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRMAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTVHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLRIERIHDIIGISESYCTNENDPESWHVQIFRSIDSNSVKDFPKDPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEDAFSPQDYLNFFCLGNREAMDGNDPSCSGSPNAENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSHPRGQIYGYRMSLWAEHTGTVEDCFNQPESLECVKRVRTMGELNWKQFAGDDVTEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGRIVGSFLGIQENLTI 1091
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 70585955 70597331 - Tan0018541.2 Tan06g2133 756837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2133 1091 CDD C2_plant_PLD 278 426 - -
Tan06g2133 1091 SUPERFAMILY Phospholipase D/nuclease 729 1023 - -
Tan06g2133 1091 ProSiteProfiles C2 domain profile. 262 404 IPR000008 -
Tan06g2133 1091 Pfam Phospholipase D C terminal 1011 1081 IPR024632 -
Tan06g2133 1091 SUPERFAMILY beta-sandwich domain of Sec23/24 23 1041 - -
Tan06g2133 1091 FunFam Phospholipase D delta 480 717 - -
Tan06g2133 1091 Pfam Phospholipase D Active site motif 606 639 IPR001736 GO:0003824(InterPro)
Tan06g2133 1091 Pfam Phospholipase D Active site motif 939 964 IPR001736 GO:0003824(InterPro)
Tan06g2133 1091 Gene3D C2 domain 279 417 IPR035892 -
Tan06g2133 1091 MobiDBLite consensus disorder prediction 143 167 - -
Tan06g2133 1091 FunFam Phospholipase D 751 983 - -
Tan06g2133 1091 Pfam C2 domain 284 405 IPR000008 -
Tan06g2133 1091 MobiDBLite consensus disorder prediction 78 167 - -
Tan06g2133 1091 SMART pld_4 604 639 IPR001736 GO:0003824(InterPro)
Tan06g2133 1091 SMART pld_4 937 964 IPR001736 GO:0003824(InterPro)
Tan06g2133 1091 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 639 IPR001736 GO:0003824(InterPro)
Tan06g2133 1091 SMART C2_3c 285 403 IPR000008 -
Tan06g2133 1091 Gene3D Endonuclease Chain A 482 718 - -
Tan06g2133 1091 MobiDBLite consensus disorder prediction 17 57 - -
Tan06g2133 1091 Gene3D Endonuclease Chain A 751 987 - -
Tan06g2133 1091 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 427 IPR035892 -
Tan06g2133 1091 MobiDBLite consensus disorder prediction 95 135 - -
Tan06g2133 1091 PANTHER PHOSPHOLIPASE D 281 1079 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan06g2133 1091 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 937 964 IPR001736 GO:0003824(InterPro)
Tan06g2133 1091 MobiDBLite consensus disorder prediction 236 258 - -
Tan06g2133 1091 MobiDBLite consensus disorder prediction 1 57 - -
Tan06g2133 1091 SUPERFAMILY Phospholipase D/nuclease 446 703 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2133 Tan-Chr6:70585955 Tan06g2709 Tan-Chr6:79497338 8.70E-31 dispersed
Tan06g2132 Tan-Chr6:70585955 Tan06g2133 Tan-Chr6:70585955 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2133 K01115 - csv:101218942 2006.49