Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2155 ATGACCCACAGCCATAGAATTGGCCAACAACATCAAATCCCACCTCAAGAGGGTGAGATGAGTGGCGGCGGTGGCGGCAGCGGCGGCCACCACGGCGGAGGACCGTGCGGCGCGTGCAAGTTTTTGAGGAGAAAATGTGTGAAAGGATGCATTTTTGCGCCCTATTTCGACTCGGACCAAGGCGCCGCCCACTTCGCCGCCGTGCATAAGGTGTTTGGAGCTAGCAATGCCTCCAAGCTCCTCCTCCGCCTCCCGCCTCCTAAGCGTCTAGATGCTTGCATTACTCTTTGTTTTGAAGCTCTTGCTAGGGTTCGAGACCCCGTCTATGGTTGCGTCGCCCATATCTTCTCCCTTCAGCAGCAGGTAGTGAATTTGCAAGCAGAAATAGCATACATTCAGGCCAAAATTTCCACCTTGCAGCGGCTGTTACCGCCGCCGTTACACAGCCTATCCCCGACCGGTCGCTACGCACCGCTCCCGGAACCGACACCGAGCTCCGACATGGGGTTTTTGTCTAACGTTCCAATGTTCCTTGACCCCCTCGAAACGCAGCTAGCTTGTAATGAAACGACAAGCAGCTTTCTGAACCCAATTGATCAGCAAGAGATGGATGAAGATGGTGATCTTCAATATTTGGCTCGAGAGTTTGTTTCAAGGTATTTGCCCGGAGTTAGATTCCGGCCGCCGTGCTCTTAG 696 54.02 MTHSHRIGQQHQIPPQEGEMSGGGGGSGGHHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLLRLPPPKRLDACITLCFEALARVRDPVYGCVAHIFSLQQQVVNLQAEIAYIQAKISTLQRLLPPPLHSLSPTGRYAPLPEPTPSSDMGFLSNVPMFLDPLETQLACNETTSSFLNPIDQQEMDEDGDLQYLAREFVSRYLPGVRFRPPCS 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 71371337 71374642 + Tan0009758.1 Tan06g2155 756859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2155 231 MobiDBLite consensus disorder prediction 1 29 - -
Tan06g2155 231 Pfam Lateral organ boundaries (LOB) domain 35 133 IPR004883 -
Tan06g2155 231 ProSiteProfiles LOB domain profile. 34 136 IPR004883 -
Tan06g2155 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 31 146 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Tan06g2155 231 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2155 Tan-Chr6:71371337 Tan10g0350 Tan-Chr10:2839583 2.60E-41 dispersed
Tan06g2154 Tan-Chr6:71327896 Tan06g2155 Tan-Chr6:71371337 2.80E-43 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27814 PF03195 LOB 3.10E-35 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2155 - - - 0.0