Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g2155 | ATGACCCACAGCCATAGAATTGGCCAACAACATCAAATCCCACCTCAAGAGGGTGAGATGAGTGGCGGCGGTGGCGGCAGCGGCGGCCACCACGGCGGAGGACCGTGCGGCGCGTGCAAGTTTTTGAGGAGAAAATGTGTGAAAGGATGCATTTTTGCGCCCTATTTCGACTCGGACCAAGGCGCCGCCCACTTCGCCGCCGTGCATAAGGTGTTTGGAGCTAGCAATGCCTCCAAGCTCCTCCTCCGCCTCCCGCCTCCTAAGCGTCTAGATGCTTGCATTACTCTTTGTTTTGAAGCTCTTGCTAGGGTTCGAGACCCCGTCTATGGTTGCGTCGCCCATATCTTCTCCCTTCAGCAGCAGGTAGTGAATTTGCAAGCAGAAATAGCATACATTCAGGCCAAAATTTCCACCTTGCAGCGGCTGTTACCGCCGCCGTTACACAGCCTATCCCCGACCGGTCGCTACGCACCGCTCCCGGAACCGACACCGAGCTCCGACATGGGGTTTTTGTCTAACGTTCCAATGTTCCTTGACCCCCTCGAAACGCAGCTAGCTTGTAATGAAACGACAAGCAGCTTTCTGAACCCAATTGATCAGCAAGAGATGGATGAAGATGGTGATCTTCAATATTTGGCTCGAGAGTTTGTTTCAAGGTATTTGCCCGGAGTTAGATTCCGGCCGCCGTGCTCTTAG | 696 | 54.02 | MTHSHRIGQQHQIPPQEGEMSGGGGGSGGHHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLLRLPPPKRLDACITLCFEALARVRDPVYGCVAHIFSLQQQVVNLQAEIAYIQAKISTLQRLLPPPLHSLSPTGRYAPLPEPTPSSDMGFLSNVPMFLDPLETQLACNETTSSFLNPIDQQEMDEDGDLQYLAREFVSRYLPGVRFRPPCS | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 71371337 | 71374642 | + | Tan0009758.1 | Tan06g2155 | 756859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g2155 | 231 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Tan06g2155 | 231 | Pfam | Lateral organ boundaries (LOB) domain | 35 | 133 | IPR004883 | - | |
Tan06g2155 | 231 | ProSiteProfiles | LOB domain profile. | 34 | 136 | IPR004883 | - | |
Tan06g2155 | 231 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 31 | 146 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Tan06g2155 | 231 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g2155 | Tan-Chr6:71371337 | Tan10g0350 | Tan-Chr10:2839583 | 2.60E-41 | dispersed | |
Tan06g2154 | Tan-Chr6:71327896 | Tan06g2155 | Tan-Chr6:71371337 | 2.80E-43 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27814 | PF03195 | LOB | 3.10E-35 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g2155 | - | - | - | 0.0 |