Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2213 ATGGCTACTTTAAACTTAGGCTCCGCTTCTCACTTTGTTGACCAACTTCAGCAACGTCCCGATCTTCACTTAGAAACGCCGCCAAATTCCGACCATGTCACTAATCTCAACCACTTCAACGGCGGCGGCAGTGGCGGCTCTGGTGGTAGCGGCGATGTCATGGTCCGTAGGCCGAGGGGCCGCCCGGCCGGGTCCAAGAACAAGCCGAAGCCGCCCGTGATCATCACGCGCGAGAGCGCCAACACGCTCCGAGCTCATATCTTGGAGGTCGGCAGCGGATGCGATGTGTTCGAGGCGGTGGCCGCCTACGCGCGGCGGCGACAACGGGGGATCTGCGTGTTGAGTGGGAGTGGAATAGTGAATAATGTTAGCTTGCGGCAGCCAGCGGCGGCAGGGTCGGTTTTGACGCTTCAAGGGAGGTTTGAGATTTTGTCGTTGTCGGGATCGTTTCTTCCACCGCCTGCTCCGCCTGGTGCTACTAGTCTCACGATCTTCTTAGCTGGAGGACAAGGACAGGTGGTCGGAGGGAATGTGGTGGGAGCTTTGATCGCGTCGGGACCAGTCATCGTCATAGCATCATCGTTTAGCAACGTTGCGTATGAGAGGTTGCCGTTGGATGAAGAAGAATTGCCGATGCAGGCGGCGGGTGGCGACGGGGACGGAGGCGACGGTGGCGGCGACGGCCATAACAACCCTTTTCCTGATGCATCTTCCGGATTGCCCTTTCTTAACCTGCCTATGAACATGGCCAATCAGAATCAATTTTTCGGTTGA 774 57.36 MATLNLGSASHFVDQLQQRPDLHLETPPNSDHVTNLNHFNGGGSGGSGGSGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFEAVAAYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEELPMQAAGGDGDGGDGGGDGHNNPFPDASSGLPFLNLPMNMANQNQFFG 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 72524571 72526045 + Tan0016969.1 Tan06g2213 756917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2213 257 CDD DUF296 84 167 IPR005175 -
Tan06g2213 257 Gene3D - 83 214 - -
Tan06g2213 257 MobiDBLite consensus disorder prediction 22 44 - -
Tan06g2213 257 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Tan06g2213 257 ProSiteProfiles PPC domain profile profile. 80 216 IPR005175 -
Tan06g2213 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 213 - -
Tan06g2213 257 MobiDBLite consensus disorder prediction 211 237 - -
Tan06g2213 257 MobiDBLite consensus disorder prediction 22 73 - -
Tan06g2213 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 219 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan06g2213 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 196 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2485 Tan-Chr2:93448395 Tan06g2213 Tan-Chr6:72524571 1.80E-44 dispersed
Tan06g2213 Tan-Chr6:72524571 Tan07g1966 Tan-Chr7:71441659 2.90E-78 dispersed
Tan10g0419 Tan-Chr10:3375213 Tan06g2213 Tan-Chr6:72524571 4.00E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2213 - - - 0.0