Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2314 ATGGGTGGCGATGGAAAGGTCTTTACGTTGGCTGAAGTCTCTCAGCACAATTCCCGCAAGGACTGTTGGTTAATCATCAATGGCAAGGTTTATAATGTAACTGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTATTGATGTCGGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGAACAAATACTACATCGGAGAGATCGACATCTCGACGATCCCCGAAAGGTTTACATACACAGCTCCAAAGCAGCCTCACTACAATCAGGATAAGACGACGGAGTTCATCGTCAAGCTCCTCCAGTTCCTGGTTCCTCTTGCAGTCTTAAGTTTCGCCGTCGGTATCCGTTTTTTCAGCAAATCAACCTGA 405 46.67 MGGDGKVFTLAEVSQHNSRKDCWLIINGKVYNVTEFLEDHPGGDEVLMSGTGKDATDDFEDVGHSESAREMMNKYYIGEIDISTIPERFTYTAPKQPHYNQDKTTEFIVKLLQFLVPLAVLSFAVGIRFFSKST 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 74361886 74365152 + Tan0017328.1 Tan06g2314 757018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2314 134 PANTHER CYTOCHROME B5 5 113 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan06g2314 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Tan06g2314 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 88 IPR036400 -
Tan06g2314 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Tan06g2314 134 Gene3D - 3 85 IPR036400 -
Tan06g2314 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Tan06g2314 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Tan06g2314 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Tan06g2314 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Tan06g2314 134 FunFam Cytochrome b5 type B 3 85 - -
Tan06g2314 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Tan06g2314 134 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2314 Tan-Chr6:74361886 Tan07g0521 Tan-Chr7:8904175 9.00E-47 dispersed
Tan10g0527 Tan-Chr10:4230019 Tan06g2314 Tan-Chr6:74361886 7.40E-57 wgd
Tan06g2314 Tan-Chr6:74361886 Tan07g2098 Tan-Chr7:72379437 2.40E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2314 K23490 - csv:101213506 250.751