Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g2326 | ATGAGCATCCGTAATAGCACTGAAAGGAGGAAGTTGGGATTCTTCTCCTGTGGAACTGGCAATCCCATAGATGACTGCTGGCGATGTGACTCCAATTGGCACCGTAACAGGAAACGCCTTGCCGAATGTGGCATCGGGTTTGGTCGGAATGCTATTGGTGGTCGTGATGGTCGTTTCTATGTCGTCACTGATTCGAGTGACAACGATCCGGTGAACCCGAAGCCAGGGACTCTTCGTCACGCTGTCATTCAAGAGAAACCTCTTTGGATTGTTTTCAAAAGGGACATGGTGATTCAATTGAAACAGGAACTCATCATGAACAGTTTCAAGACCATTGATGCTCGAGGGGTCAATGTACACATTGCCAATGGCGCTTGCATCACAATTCAGTTTGTGACTAATATCATTATCCATGGTCTTCACATCCATGATTGCAAGCCCACAGGGAATGCCATGGTGAGAAGCTCTCCAACTCATTTTGGGTGGAGAACCATGGCTGATGGAGATGCCATTTCCATCTTTGGATCAAGCCATATATGGATTGACCACAATTCACTCTCTAATTGTGCTGATGGCCTTGTTGATGCTGTCATGGGCTCAACTGCAATCACTATCTCCAACAATCACTTCACTCACCACAATGAGGTGATGCTTCTAGGCCATAGTGATTCCTACACAAAGGACAAGCAAATGCAAGTCACCATTGCTTATAACCATTTTGGAGAGGGACTCATTCAAAGAATGCCGAGATGTAGGCATGGCTATTTCCATGTGGTGAACAATGACTACACTCACTGGGAAATGTATGCCATTGGTGGGAGTGCAAACCCGACCATCAACAGTCAAGGCAACAGATATGCTGCTCCAACCAACCCTTTTGCCAAAGAGGTGACAAAGCGAGTCGAAACAGCGGAGAGCGAATGGAAGGGCTGGAACTGGAGATCAGAAGGAGATATGTTGCTGAATGGAGCTTATTTCACCCCATCAGGCGCTGGAGCTTCAGCAAGCTATGCCAGGGCCTCCAGCTTAGGAGCCAAATCTGCTTCCATGGTTGGCTCCATCACATCTTCAGCAGGTTCGCTCCCTTGCCGCCGAGGTCATCCCTGCTAG | 1110 | 48.02 | MSIRNSTERRKLGFFSCGTGNPIDDCWRCDSNWHRNRKRLAECGIGFGRNAIGGRDGRFYVVTDSSDNDPVNPKPGTLRHAVIQEKPLWIVFKRDMVIQLKQELIMNSFKTIDARGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPTHFGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLLGHSDSYTKDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPTNPFAKEVTKRVETAESEWKGWNWRSEGDMLLNGAYFTPSGAGASASYARASSLGAKSASMVGSITSSAGSLPCRRGHPC | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 74603497 | 74606352 | + | Tan0005660.2 | Tan06g2326 | 757030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g2326 | 369 | SUPERFAMILY | Pectin lyase-like | 3 | 363 | IPR011050 | - | |
Tan06g2326 | 369 | SMART | amb_all | 95 | 292 | IPR002022 | - | |
Tan06g2326 | 369 | PANTHER | PECTATE LYASE 18-RELATED | 12 | 366 | IPR045032 | GO:0030570(InterPro) | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 269 | 288 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 43 | 60 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 167 | 188 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 311 | 335 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 67 | 92 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 103 | 119 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 247 | 266 | IPR018082 | - | |
Tan06g2326 | 369 | PRINTS | Pollen allergen Amb family signature | 340 | 363 | IPR018082 | - | |
Tan06g2326 | 369 | Pfam | Pectate lyase | 107 | 284 | IPR002022 | - | |
Tan06g2326 | 369 | Gene3D | - | 20 | 362 | IPR012334 | - | |
Tan06g2326 | 369 | FunFam | Pectate lyase | 20 | 362 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g2326 | Tan-Chr6:74603497 | Tan10g0579 | Tan-Chr10:4745473 | 1.50E-200 | dispersed | |
Tan06g2325 | Tan-Chr6:74602422 | Tan06g2326 | Tan-Chr6:74603497 | 4.10E-221 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g2326 | K01728 | - | csv:101217580 | 758.829 |