Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2373 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGCTGCGGCGGCATCGTCGACAGAAGTAGTCGATTCCAATCAGCAGTCCCACAAATTGGAGAGAAAATGGACCTTTTGGTTCGACAACCAATCGAGGCCGAAGCAAGGTGCCGCTTGGGGCACCTCTCTGCGCAAGGTTTATACCTTCGATACCGTTGAAGAATTTTGGTGTTTGTACGATCAGATATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACTTGTTCAAATCTGGAGTCGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGACTAACCTCGATAATATGTGGTTGGAAACGTTGATGGCTTTAATTGGGGAACAATTCGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCATTGTGGACTAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGGAAATGGAAGGAGATCATCGATGTCACCGACAAGATTTCGTTCAGTTTTCATGAGGATTTGAGAAGGGAAAAGTCAGCAAAAGCTCGATACAGTGTCTGA 609 48.11 MAGEVAVEGAAAAASSTEVVDSNQQSHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKTNLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 75802675 75804800 + Tan0015145.1 Tan06g2373 757077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2373 202 Gene3D RNA Cap, Translation Initiation Factor Eif4e 18 202 IPR023398 -
Tan06g2373 202 Pfam Eukaryotic initiation factor 4E 28 184 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Tan06g2373 202 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 17 194 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Tan06g2373 202 SUPERFAMILY eIF4e-like 20 195 IPR023398 -
Tan06g2373 202 ProSitePatterns Eukaryotic initiation factor 4E signature. 83 106 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Tan06g2373 202 FunFam Eukaryotic translation initiation factor 4E 18 202 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2553 Tan-Chr5:76913600 Tan06g2373 Tan-Chr6:75802675 1.20E-59 dispersed
Tan06g2373 Tan-Chr6:75802675 Tan10g1559 Tan-Chr10:24572885 7.70E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2373 K03259 - csv:101208495 385.185