Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2394 ATGGCTCCAACTCCGTCGTCGAAATCAAATCAAGGTCACACTAGTCAATTGAGAACTCCTCAAGCGAAGCGGCTCAATTTCAACCCCCCTAGGGCACATTCATCCCCTTTCCCCAATTCCGCCATTAAAGATAACTCCCAATCGGAGCATCCAGTCGAAGTAATCGGCCGGATCCGAGACTATCCGGACCGGAAAGAAAAACCGGTTTCGATTCTTCAGATCAATCCCGACGGGCAGAACGTTCGGGTTCGGGCCGATTTCGGGTACCGCGATTTCAGCCTCGATGGAATTTCTCTGTCGGAAGAGGAAGATCTCGACTCGTTTTACAAGAAGTTCGTCCAAGCGAGGATTCACGGCGTTAAGTTGGGGGAGAAATGTACGATTATGATGTACGGACCCACCGGCGCCGGCAAGAGCCACACCATGTTTGGCTGTGCGAAGCAGCCGGGGATTGTGTATCGGTCGCTGAAGGACATTTTGGGCGACGGCGAAAGTGAAGCCGGCAGCGGCGAGCGGTTGGGCGTTGGGATGTTTGTACAAGTTACGGTGCTGGAGATTTATAATGAAGAAATATATGATCTTCTTTCGAGTAATTCTGGTGGAGGGCTAGGGCTTGGCTGGCCTAAGGGCAGTGCCTCTAAGGTGAAGCTTGAAGTGATGGGGAAGAAGGCAAAGAATGCTACTTATCTATCTGGGAATGAAGCAGGAAAGATATCCAAAGAGATTCAGAAAGTGGAGAAAAGAAGGATTGTTAAAAGTACACTATGTAATGAGAGAAGTTCCAGAAGTCATTGCATGATAATCCTTGACGTGCCAACTGTCGGTGGGCGCCTAATGCTCGTCGATATGGCTGGTTCTGAAAATATAGAGCAAGCTGGGCAAGTTGGATTTGAGGCAAAAATGCAGACAGCAAAGATTAATCAAGGTAACATTGCACTGAAAAGAGTGGTTGAATCAATTGCCAATGGTGATTCTCATGTGCCTTTCAGAGACAGTAAATTGACTATGCTTCTGCAGGATTCTTTTGAGGATGATAAATCCAAAATTCTGATGATTCTGTGTGCCAGCCCTGATCCAAAGGAATTACACAAGACAATCTCTACTCTCGAATATGGTGCGAAAGCCAAATGCATCGTTCGTGGTCCTCATACGCCAACGAAGGATAAATGTGGTGCTGATGATTCTGCTTCTGCTGTTATTTTGGGATCGAGAATTGCAGCAATGGACGACTTCATCTTCAAGTTACAAAAGGAGAACAAACTGAGAGAGAAAGAACGAAATGAGGCACATAGAGATCTCATGAAGAAAGAAGAAGAGGTAGCACAATTGAGAGCTAAGCTCGAGCTAGCTGGGTCGAGAGGATCAGGCGTGAGTGAGGAAGAGATCAATTCGAAGGTGAATGAGAGAACCCAACTTTTGAAACTTGAGTTGGAGAGGAAGCTGGAGGAGTGCCAGAGAATGGCCAATGAATTTGTTGAACTGGAAAGGAGAAGAATGGAAGAGAGGATACTCCAGCAGCAACAAGAAGTCGAAATGTTGAGACGACGTTTGGAAGAGATCGAGTCCGAGCTATTGAATTCAAAGGATGCAACAACAAACAATGATGTAACCAAATCAAGGGACATGGATGGCTGCAGGCTTGCTAAAAGGCTTTTAGGAGTTTATGCAAGTGCAGATGCAGGGATGGTGAAATCCATGGACTTGGACATGGACGACCAAGAACCGATTCACGAAGTGAAACTCATCGGCGGTGCAGATTACCAACCGACTACCAACAACAGTATCCAAAGCCTACTAGATAAAGTGAACGAAACAGTTGATCATGACGTGTTTTCATCGCGATTTGGGGACGGGGATAGAGTATGCCTGAGTACCGTGTTCGAGGAAGAAGAAGCAGAGGAGGAAGAGGAGAAAGAAGTAATAGAAGAAAAGAGAGTAGTGAGTACAGTTGAAGGACTCACCGAACTGACATCAAATGTTATGAACAGAAGCCAGAACAAAGATGATTTTCTCAAGGAGAGATCAGAGATCGGCATCGGATTGATAAACGACAACGAATACTCGAAGGACACCGCATTCTCGAGAAAATTGAGAATTCAAAATATATTTACTCTTTGTGGAAACCAGAGAGAGCTTTCACAACAAATTCCCTCAATGCCCGAGAAGAAGAGACCTGATGATGCTGAAAATCAGCACCTATCTCCATTGAAAACAATTGGGGAAGTTCAGAAACCTGCAACAGATCATTACAGTCAAATTCTATCAGACCTGACGAATCAGAATGGAGCTGTTTTAGCAGAGAATGAAGAGGCAATGCAACCTATTATAAAGCTAGTAAAGGGAGGAGTAAACAGCCCAGGTATTGTTGTACCATTGAGTCCAAGTCCATTGTGCTCAAAGGAGAACAAGCTACCCGTTACGCCGAACGTCGTATCGCAGCAAAGCGATGGCCTATCGCCGAGGCTCAGCACCACGCCGTTCATCACTGTAAGAAGACACTGA 2502 45.72 MAPTPSSKSNQGHTSQLRTPQAKRLNFNPPRAHSSPFPNSAIKDNSQSEHPVEVIGRIRDYPDRKEKPVSILQINPDGQNVRVRADFGYRDFSLDGISLSEEEDLDSFYKKFVQARIHGVKLGEKCTIMMYGPTGAGKSHTMFGCAKQPGIVYRSLKDILGDGESEAGSGERLGVGMFVQVTVLEIYNEEIYDLLSSNSGGGLGLGWPKGSASKVKLEVMGKKAKNATYLSGNEAGKISKEIQKVEKRRIVKSTLCNERSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQVGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKELHKTISTLEYGAKAKCIVRGPHTPTKDKCGADDSASAVILGSRIAAMDDFIFKLQKENKLREKERNEAHRDLMKKEEEVAQLRAKLELAGSRGSGVSEEEINSKVNERTQLLKLELERKLEECQRMANEFVELERRRMEERILQQQQEVEMLRRRLEEIESELLNSKDATTNNDVTKSRDMDGCRLAKRLLGVYASADAGMVKSMDLDMDDQEPIHEVKLIGGADYQPTTNNSIQSLLDKVNETVDHDVFSSRFGDGDRVCLSTVFEEEEAEEEEEKEVIEEKRVVSTVEGLTELTSNVMNRSQNKDDFLKERSEIGIGLINDNEYSKDTAFSRKLRIQNIFTLCGNQRELSQQIPSMPEKKRPDDAENQHLSPLKTIGEVQKPATDHYSQILSDLTNQNGAVLAENEEAMQPIIKLVKGGVNSPGIVVPLSPSPLCSKENKLPVTPNVVSQQSDGLSPRLSTTPFITVRRH 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 76241428 76244877 + Tan0002942.1 Tan06g2394 757098

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2394 833 MobiDBLite consensus disorder prediction 810 833 - -
Tan06g2394 833 ProSiteProfiles Kinesin motor domain profile. 51 378 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 Coils Coil 624 644 - -
Tan06g2394 833 Coils Coil 467 530 - -
Tan06g2394 833 MobiDBLite consensus disorder prediction 32 47 - -
Tan06g2394 833 MobiDBLite consensus disorder prediction 810 826 - -
Tan06g2394 833 SMART kinesin_4 49 386 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 Coils Coil 419 453 - -
Tan06g2394 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 385 IPR027417 -
Tan06g2394 833 PANTHER KINESIN-RELATED 52 723 IPR027640 GO:0003777(PANTHER)|GO:0003777(InterPro)|GO:0005871(PANTHER)|GO:0005874(PANTHER)|GO:0007018(InterPro)|GO:0007018(PANTHER)|GO:0008017(PANTHER)|GO:0016887(PANTHER)
Tan06g2394 833 Pfam Kinesin motor domain 86 378 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 MobiDBLite consensus disorder prediction 1 50 - -
Tan06g2394 833 PRINTS Kinesin heavy chain signature 123 144 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 PRINTS Kinesin heavy chain signature 254 271 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 PRINTS Kinesin heavy chain signature 327 348 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 PRINTS Kinesin heavy chain signature 277 295 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Tan06g2394 833 MobiDBLite consensus disorder prediction 1 23 - -
Tan06g2394 833 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 33 383 - -
Tan06g2394 833 Gene3D Kinesin motor domain 33 381 IPR036961 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2394 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2394 Tan-Chr6:76241428 Tan05g3170 Tan-Chr5:83616498 2.50E-30 dispersed
Tan06g2394 Tan-Chr6:76241428 Tan06g0303 Tan-Chr6:2363529 3.50E-24 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g735 . . . . . Bpe14g01265 . . Cmo08g01050 Cmo17g00152 . . . . . . . . . . . . . . . . . . . . . Cone14ag0161 Cone15ag0172 . Cone4ag0340 . Csa02g01048 . . Blo02g00696 . . Bda13g00053 . . . . Sed09g0662 . . Cma08g01075 Cma17g00153 Car08g00947 Car17g00135 Cpe12g00130 Cpe17g00203 Bhi12g01600 Tan06g2394 Cmetu05g0124 . . . Lcy13g0389 . . . . . . . . . . Cme05g00583
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006035 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 5 2 1 1 1 1 1 1 1 1 2 1 1 39