Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2405 ATGGAAGCTACTAGGTGTTGGTTTAATAAGTTCAGATCCAAAGATAAACTAAAGCCCTCAACAAATAAGGAGAGTACAGGAAATGCACGAGATGCATCGAGAGCACCAACCAGTGAAGAGGTACCCTCAAATGTCACCAAGCAGAAGGTTGCAGCTGCCAAACAGTATATAGAAAACCACTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTAGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAAGAAGAGCAAAGCAACCTGCTTAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCATTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAACTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGCTGTATTGCTCTTTCCAAGATGAAGAGTATTTGTATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACAGAAGATGAGGCCCGATTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCTGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGACTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAATCTTAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTACAACATTGGCAGAGGAACAGGCGGATGCTTGCTTATTCTACAGTTGGAACTCCCGATTATATTGCTCCGGAAGTTTTGCTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTATGAAATGCTGGTGGGATTTCCACCGTTTTACTCAGATGAGCCAATGTCAACCTGTAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAACTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAGAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCGCACCCATGGTTCAAGGGCATTGAGTGGGACAAGTTGTATCAAATGAAAGCTGCATTCATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGAGAAGTTTGAAGAGACTGAAAACCCAATTCAGACGTCATCAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTCGTGGGTTATACATACAAAAACTTTGAAATCATCGAGGATAATCAATTGCCTGGAATAGCTGAATTGAAGAAGAAGAGCGCGAAATCAAAAAGGCCTTCCATCAAATCTCTTTTCGATAACGAATCTACAATGGTGACGAATCAACCTGTTCAAGGCAGCTTTTTGAAACTCTTGCCTCCCCAACTAGAAGTCCCCGAGAAACCAACCGATGAGCGCCAATGA 1650 41.09 MEATRCWFNKFRSKDKLKPSTNKESTGNARDASRAPTSEEVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENPIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIEDNQLPGIAELKKKSAKSKRPSIKSLFDNESTMVTNQPVQGSFLKLLPPQLEVPEKPTDERQ 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 76338891 76347279 - Tan0022390.1 Tan06g2405 757109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2405 549 CDD STKc_NDR_like 117 482 - -
Tan06g2405 549 SMART pkinase_C_6 419 483 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 Pfam Protein kinase domain 315 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 Pfam Protein kinase domain 121 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 Coils Coil 68 102 - -
Tan06g2405 549 MobiDBLite consensus disorder prediction 22 48 - -
Tan06g2405 549 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 485 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Tan06g2405 549 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Tan06g2405 549 CDD MobB_NDR_LATS-like 53 114 - -
Tan06g2405 549 SUPERFAMILY Protein kinase-like (PK-like) 94 471 IPR011009 -
Tan06g2405 549 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Tan06g2405 549 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 MobiDBLite consensus disorder prediction 13 48 - -
Tan06g2405 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Tan06g2405 549 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Tan06g2405 549 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524(InterPro)
Tan06g2405 549 SMART serkin_6 119 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2405 549 Gene3D Phosphorylase Kinase; domain 1 108 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1828 Tan-Chr2:84185552 Tan06g2405 Tan-Chr6:76338891 1.50E-174 dispersed
Tan03g2815 Tan-Chr3:81093592 Tan06g2405 Tan-Chr6:76338891 2.30E-226 dispersed
Tan03g2816 Tan-Chr3:81093592 Tan06g2405 Tan-Chr6:76338891 2.30E-226 dispersed
Tan05g3392 Tan-Chr5:85982695 Tan06g2405 Tan-Chr6:76338891 2.70E-65 dispersed
Tan06g1127 Tan-Chr6:11113320 Tan06g2405 Tan-Chr6:76338891 2.10E-246 dispersed
Tan06g1128 Tan-Chr6:11113320 Tan06g2405 Tan-Chr6:76338891 6.90E-245 dispersed
Tan06g2405 Tan-Chr6:76338891 Tan09g1117 Tan-Chr9:63474173 2.50E-175 dispersed
Tan06g2405 Tan-Chr6:76338891 Tan09g1116 Tan-Chr9:63472031 5.30E-186 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67814 PF00069 Pkinase 1.00E-65 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2405 K08790 - csv:101205120 1074.69