Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g2437 | ATGGATCGGGTGGGCTTTCCGGCCACCGACCCGACAGAAACCGCCGTCAACGGCCACGGAAGAGATCATGATGACGACGAGGACGAGCAGAAGGAAGGCGGCGTGGTGGTCGGAAATCGCCGATCGAGAGGGCGACCACCGGGATCCAAAAACAAACCGAAATCCCCAATCATCGTCACGCGCGACAGTCCTCACGCGCTTCGCACGCACGTCATAGAGATCGCCGGAGGAGCCGACGTCGCCGACAGCATAAACCAATTCTCTCGCCGCCGGCAGCGTGGGATTTGCGTTCTCAGCGGCAGTGGCACGGTGGCCGACGTCACTCTCCGGCAATCCGCTGCTTCCGCCGCCGTGATTCCACTTCACGGCCGGTTCGAGATTCTGTCTCTGTCAGGTTCTTTTCTTCCCGGTCTAGCCCCTCCCGGTTCGACCGGGCTGACCGTGTACCTCGCCGGCGGGGAGGGGCAGGTGGTCGGAGGGACGGTGGTGGGCCCACTGTTGGCGGCTGGGCCTGTAGTGTTGATAGCTGCTACTTTTGCTAATGCAACATATGAGAGATTGCCTTTAGAAGACGACCATAATTTTCAAGAAAGAGAGTTTTCTCCGGCCGCCACAGGCAGCGGAGAAGTGAAGGCGCCGCCGCCGCAGCCGTGTCCTCCGACGACAGCTTCAATTTATGAGATGATGATACCAAATAATCATCATGAGATTGGGGGACACATGCTTGGGCTCATGGGAGACCACCTTGTTTAA | 753 | 58.83 | MDRVGFPATDPTETAVNGHGRDHDDDEDEQKEGGVVVGNRRSRGRPPGSKNKPKSPIIVTRDSPHALRTHVIEIAGGADVADSINQFSRRRQRGICVLSGSGTVADVTLRQSAASAAVIPLHGRFEILSLSGSFLPGLAPPGSTGLTVYLAGGEGQVVGGTVVGPLLAAGPVVLIAATFANATYERLPLEDDHNFQEREFSPAATGSGEVKAPPPQPCPPTTASIYEMMIPNNHHEIGGHMLGLMGDHLV | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 76823675 | 76825082 | + | Tan0015296.1 | Tan06g2437 | 757141 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g2437 | 250 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 68 | 180 | IPR005175 | - | |
Tan06g2437 | 250 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 22 | 203 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Tan06g2437 | 250 | CDD | DUF296 | 68 | 151 | IPR005175 | - | |
Tan06g2437 | 250 | MobiDBLite | consensus disorder prediction | 16 | 38 | - | - | |
Tan06g2437 | 250 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 66 | 192 | - | - | |
Tan06g2437 | 250 | Gene3D | - | 67 | 198 | - | - | |
Tan06g2437 | 250 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Tan06g2437 | 250 | FunFam | AT-hook motif nuclear-localized protein | 67 | 194 | - | - | |
Tan06g2437 | 250 | ProSiteProfiles | PPC domain profile profile. | 64 | 201 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g2437 | Tan-Chr6:76823675 | Tan08g0388 | Tan-Chr8:3505718 | 2.80E-65 | dispersed | |
Tan10g0717 | Tan-Chr10:5902568 | Tan06g2437 | Tan-Chr6:76823675 | 3.80E-66 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g2437 | - | - | - | 0.0 |