Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2463 ATGGCTCGGGACGGGCATGTAGTGCCGGTGGATCCACAGATGGCGTTGACTGGGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGTATTCAATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGACCCTTTGCTTTCTTATCCCTCCACGATTTTGGGCCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCAACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTTCAGAGGCGACTGCCTCCTTCTAATGTCTTCCAGGAAATTCAAGGAGAAGGGAAAGAGTATCAGGGTGGGCTACAGGATGGTGAAGCTGAAGAAGATGAATCCCCATTTGAATTCCGTGCCCTCGAGGTAGCTTTGGAAGCTATATGTAGTTTTCTTGCCGCACGGACAACTGAACTGGAGACTGCTGCTTATCCAGCCTTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAATTTGGACAGAGTTCGTAAATTGAAGTGTGCAATGACCAGGTTGACTGCAAGGGTTCAAAAGGTGAGAGACGAGCTTGAACAATTACTGGACGATGATGATGATATGGCAGAGCTTTACTTGTCAAGAAAGATGAGTTCATCTTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACCATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCGAGTATTGCAACACGTGGGGATGAGAATGACATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGACGGTACATTGAACAAATTAACTACGCTGCGAGAATATATTGATGACACAGAAGATTATATCAATATCCAGCTCGACAATCATCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACAGTTTGTATGTCTATCTATTCTTTGGTGAGTGCAATATTTGGCATGAACATTCCATACACTTGGAACGACGATCACGGATACATGTTTAAATGGGTTGTCATTATTTCTGGAGTAGGTTGCGCTATGCTGTTCATCGCAATTGTTTGCTATGCTCGCCTCAAAGGTTTGGTAGGGTCTTGA 1176 44.81 MARDGHVVPVDPQMALTGKKKKQSSRNWILLDCTGQGTVLDVDKYSIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNVFQEIQGEGKEYQGGLQDGEAEEDESPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKCAMTRLTARVQKVRDELEQLLDDDDDMAELYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASIATRGDENDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCMSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIISGVGCAMLFIAIVCYARLKGLVGS 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 77240801 77247719 - Tan0001266.1 Tan06g2463 757167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2463 391 Gene3D - 14 99 - -
Tan06g2463 391 FunFam Magnesium transporter MRS2-1 16 99 - -
Tan06g2463 391 CDD Mrs2_Mfm1p-like 28 388 IPR039204 -
Tan06g2463 391 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 387 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan06g2463 391 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 327 378 IPR045863 -
Tan06g2463 391 Coils Coil 193 220 - -
Tan06g2463 391 Pfam Magnesium transporter MRS2-like 271 318 - -
Tan06g2463 391 Pfam Magnesium transporter MRS2-like 40 235 - -
Tan06g2463 391 Gene3D Magnesium transport protein CorA, transmembrane region 105 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0792 Tan-Chr1:7556071 Tan06g2463 Tan-Chr6:77240801 1.60E-87 dispersed
Tan01g0793 Tan-Chr1:7556071 Tan06g2463 Tan-Chr6:77240801 1.60E-87 dispersed
Tan06g2463 Tan-Chr6:77240801 Tan07g2271 Tan-Chr7:74051858 8.00E-120 dispersed
Tan02g1037 Tan-Chr2:15647461 Tan06g2463 Tan-Chr6:77240801 1.30E-77 transposed
Tan04g2493 Tan-Chr4:83806570 Tan06g2463 Tan-Chr6:77240801 6.40E-89 transposed
Tan06g2463 Tan-Chr6:77240801 Tan07g2269 Tan-Chr7:74051858 8.80E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2463 K16075 - csv:101203841 665.996