Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2485 ATGAGTGCCGGCGCGGCGACGTTCCGGTCTATACTTGATAAACCCCTCAACCAGTTGACGGAGGATGACATTTCGCAGCTCACTCGAGAGGATTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCGTGGAACAAGTCTCAGGCGATCCAGCAGGTTATTTCTCTCAAAGCATTGCTCGAACCTTGTGATGATTCCGGCGCCGGTGCTCTCAGGAAGGTCGTCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGATTCACCCAAAGAACCGAGTGATGATGCTCAGGTTACTTTGTCAGTTGATGAATCTGCGTATAGCAATGTGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGCTGAACCAGACAACAAGGTCACCAGTCCCAGAGATCAATGCGATACAAATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCACCAGATAAGGCATGGGCAATCATGCATCTCGCTGCTAGTCCAATTCATTTCCCTCAGAATCTCCCCTTGGGTGGAACTGCTGCATGTCAGTCTCCACCATGTCTTTTGCAGAATGCCAACGAGAGAGAAGACTTTTTTCCTCCTAGTGCTACTATCTATCGAAATGTGCATACAGAGAAGATGGTTGAGTACCCTCAGCAGCAGCATGTAAAAGGAACCAGTACTCGAGATTCTGGTAAGCGTTCTGTTTGCTTGCAATTTTGTAAATTGCTTGTGAAAAGAGAAACTCTGCATTTCTCATGTTTGCTGGAAACGTACATAACTCTGTTCTTTGTCCCAGTAATTTTGAATCTGCTTTTATGCCCTTGGACAAATTTTGTTGTGATAATTTGTATAAATGTACAACTACAAGCTTTGTGCTCCCAACCCAACTACCTTTTCCTCGATAAATCAATTTCAACCCTTATAGTATTGTCTTGA 960 45.1 MSAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVVVSPRVNSNQGDSPKEPSDDAQVTLSVDESAYSNVETAKSTPEDPPAEPDNKVTSPRDQCDTNGVDGQMTIFYCGKVNVYDGVPPDKAWAIMHLAASPIHFPQNLPLGGTAACQSPPCLLQNANEREDFFPPSATIYRNVHTEKMVEYPQQQHVKGTSTRDSGKRSVCLQFCKLLVKRETLHFSCLLETYITLFFVPVILNLLLCPWTNFVVIICINVQLQALCSQPNYLFLDKSISTLIVLS 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 77544765 77549936 - Tan0014723.3 Tan06g2485 757189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2485 319 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 194 IPR040390 GO:0005634(PANTHER)|GO:0009611(PANTHER)|GO:0031347(PANTHER)|GO:2000022(PANTHER)
Tan06g2485 319 Pfam tify domain 144 172 IPR010399 -
Tan06g2485 319 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Tan06g2485 319 SMART tify_2 138 173 IPR010399 -
Tan06g2485 319 MobiDBLite consensus disorder prediction 109 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2483 Tan-Chr6:77544765 Tan06g2485 Tan-Chr6:77544765 2.00E-135 dispersed
Tan06g2484 Tan-Chr6:77544765 Tan06g2485 Tan-Chr6:77544765 1.60E-135 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27843 PF06200 tify 2.80E-15 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2485 - - - 0.0