Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2524 ATGAATGGTGATACAACAACAAACTCTGAACCAGACAGCTCTGAATATGTCGAAGTTGATCCCACAGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGAGCATCGAAGACAGTTTACAGAGCCTTCGATGAATACGATGGCATTGAAGTGGCGTGGAATCAAGTGAAGCTTTGTGATTTTCTTCAAACTCCAGAAGATCTCGAGCGGCTGTACAGAGAAATCCATTTGTTGAAGACTCTAAAACACAACAACATAATGAAATTCTATTCTTCTTGGGTTGACACTGCAAATAGAAACATTAACTTTGTGACAGAGATGTTCACTTCTGGGACTCTTCGACAATATAGGCTGAAGCACAAGAGAGTCAACATCAGAGCTGTGAAGCATTGGTGCAGACAGATTTTAAGAGGTCTTCTTTATCTTCATAGCCATGACCCGCCTGTAATCCACAGAGATCTTAAATGTGACAATATTTTTGTCAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCTATTCTTCGCAAATCCTATGTTGCTCGATGTGTTGGAACGCCGGAGTTTATGGCTCCAGAGATTTACGAAGAGGAGTATAATGAATTAGTTGATATCTATTCTTTTGGAATGTGCATTTTGGAGATGGTTACTTTTGAATATCCATACAGTGAATGCAACCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAGGAAACCAGATGCTTTGTATAAGGTAAAGGATCTCGAGGTGCGGTATTTCGTCGAGAAATGCTTGGCTACTGTATCGACTAGGCTTTCTGCTAGGGAGCTTTTGAATGATCCTTTTCTTCAAATTGATGGTTGTGATTCCTTGCTGAGGCCAATAGACTACTATTCAGAATATGATGAAGTGAACAATTCCCTTATTAGAGGACCTCTTTATGGAGTTTCTCATGGTTCTTTGGCTAATGGGTATGTGAATTATTTTGGGCATGAGGCTGGGAATGGTTTTGATTACTGTCCGATCCAAACCGAAGTGAGCGAGATTGATCTTTTCTCCTGTCAAGAGGATGAGCATTTGGCAGATGTTGATATCACTATTAAAGGGAGAAGAAGAGGCGACGATGATATATTTCTACGGCTTCGAATTGCAGATAAAGAAGGTCGGATTCGAAACATCTACTTCCCCTTTGATTTGGAGAATGACAGTGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGACATTACTGATCAAGATGTGAAGAAAATTGCTGATATGATAGATGGGGAAATTGCTACATTGGTGCCAGAATGGAAGAAGGGAACATGCTTAGAGGAAACTCGTTATTGCACTGATTCTAATGTTTGTCACAATTGTGCCTTAAATAGTAATCTTTTGGATTACGTTTCGCCGCATAATCCCGGGACGAAGAACCTGCACATTCTTCAGTGTTCTGAAGAGCATGGTTGTGCTTCCATCCATGGCCGTTTTGAAGAGATCACATATCAAGTTGAAGGGTCAGAACAAGAAAACTTGCATAGAACATCAGAGAATTTGAGCGACATCCATTACGCCGATATTTGGGCGCAACGAGATGGACCAGAGATTGTTTCACATGAATCAGGAGAAGTCAGTTGCAACGAATCACATGGAACATCGGAGCAGCCGAAACTCGAGAAGGAAGGAAGAACTGTAAATATGGACAATCATCAAACAGAATTCCAAACAAGACTCTCTACCTCATCGAGTCCTTTGGTGTCCTTCGCTGATGACCACGAGAACGAAATTCGACAAGAACTCAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGCTAAGGGATCAACAATTAGGAGTCAAAACCAAAACCCTCAGCTTGCACTCGAATCCCAACCTCGCTGAGACCGATATCGGAGCTTCGGTATATTTGCTCTCACCAAACTTCAATGAAGCAAAAAATAAGAATCTCCTAGCATCTCTCTCCTTTGGCAAGAACATCACTTCACATTCCCCCCATGTCGCTGATAACATTTCAGAAAACCAAACGTTCCAAGACGAAAACATCGTCGACGAGTCAAGTAGTCCCGAGCTGATGATCACAGCCAAGAGTTTCTATACAGGAGCATTGTTTCCACATTCTCTGCAAAGAGCAACCTCCCTTCCTGTTGATGCCATAGATTTTTAG 2196 41.76 MNGDTTTNSEPDSSEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGIEVAWNQVKLCDFLQTPEDLERLYREIHLLKTLKHNNIMKFYSSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGRKPDALYKVKDLEVRYFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLRPIDYYSEYDEVNNSLIRGPLYGVSHGSLANGYVNYFGHEAGNGFDYCPIQTEVSEIDLFSCQEDEHLADVDITIKGRRRGDDDIFLRLRIADKEGRIRNIYFPFDLENDSALSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKKGTCLEETRYCTDSNVCHNCALNSNLLDYVSPHNPGTKNLHILQCSEEHGCASIHGRFEEITYQVEGSEQENLHRTSENLSDIHYADIWAQRDGPEIVSHESGEVSCNESHGTSEQPKLEKEGRTVNMDNHQTEFQTRLSTSSSPLVSFADDHENEIRQELRWLKAKYQMQLRELRDQQLGVKTKTLSLHSNPNLAETDIGASVYLLSPNFNEAKNKNLLASLSFGKNITSHSPHVADNISENQTFQDENIVDESSSPELMITAKSFYTGALFPHSLQRATSLPVDAIDF 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 77851752 77855322 - Tan0018108.1 Tan06g2524 757228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2524 731 CDD STKc_WNK 24 283 - -
Tan06g2524 731 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2524 731 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Tan06g2524 731 SUPERFAMILY Protein kinase-like (PK-like) 29 284 IPR011009 -
Tan06g2524 731 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Tan06g2524 731 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 620 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan06g2524 731 ProSiteProfiles Protein kinase domain profile. 26 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2524 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2524 731 MobiDBLite consensus disorder prediction 543 562 - -
Tan06g2524 731 MobiDBLite consensus disorder prediction 1 15 - -
Tan06g2524 731 Coils Coil 599 619 - -
Tan06g2524 731 MobiDBLite consensus disorder prediction 1 20 - -
Tan06g2524 731 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Tan06g2524 731 FunFam probable serine/threonine-protein kinase WNK9 109 288 - -
Tan06g2524 731 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Tan06g2524 731 SMART serkin_6 26 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2524 731 Gene3D - 376 465 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0540 Tan-Chr5:3779961 Tan06g2524 Tan-Chr6:77851752 7.70E-136 dispersed
Tan05g1965 Tan-Chr5:69268198 Tan06g2524 Tan-Chr6:77851752 8.80E-142 dispersed
Tan05g1966 Tan-Chr5:69268198 Tan06g2524 Tan-Chr6:77851752 4.40E-127 dispersed
Tan06g2524 Tan-Chr6:77851752 Tan09g0381 Tan-Chr9:35389756 1.20E-190 dispersed
Tan06g2524 Tan-Chr6:77851752 Tan08g1774 Tan-Chr8:69733366 2.30E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67817 PF00069 Pkinase 5.90E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2524 K08867 - csv:101210511 1291.56