Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g2580 | ATGCAGCCCGATCAGAGAAGAAAGTCGTCAATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACTCATACTGGTGATAAAGTTGCAATTAAGAAAATCAATGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGCGAGATAAAACTTCTAAGACTATTGAGACATCCAGACATTGTGGAGATAAAGCACATCCTCCTACCTCCATCTAGAAGGGAGTTCAAGGATATATATGTCGTGTTTGAGCTTATGGAATCTGATTTACACCAAGTTATCAAAGCAAATGACGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGTGGCTTGAAATATATACACACAGCAAATGTCTTCCACCGGGACCTAAAACCCAAAAATATCTTAGCGAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCAAGAGTTGCTTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGGGCTCCTGAACTGTGTGGTTCCTTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCAGAGCTTTTAACTGGAAAACCACTTTTCCCCGGAAAGAATGTCGTCCACCAATTAGATTTGATGACAGATTTTCTGGGAACCCCGAATGCAGAAGCCATAGCCAGGGTACGAAACGAGAAAGCTCGGAGATACTTAAGCAGTATGCGTAGGAAAAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCACTTGCACTTCGCTTATTGGAAAGAATGCTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAAGTTGAGAGAGAGCCATCTGCTCAACCGGTTACTAAGATGGAATTTGAATTTGAGAGACGAAGGATAACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAGATTCTCGAGTACCATCCAAAGATGTTGAAGGAATACTTAGATGGATCAGAACCAACCGGTTTCATGTATCCAAGTGCAGTTGACCATTTTAAGAAGCAATTTGCCTTCCTTGAAGAACACTATGGAAATGGAGCAACTGTTGCTCCTCCTGAAAGACAACATGCATCCTTGCCTAGGCCATGTGTTTTATATTCAGATAACATGGTGCAGAACCCGGCACAAGTTGCGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACCAGTGGATAGGACTTGCAATATTCCTTTGACCAGAGTTCCTATTCAAGTTCCTCAATCTATTCAAGCAGGAAATGCTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACAACTGTGGAGTAACAGCAGCAGCAGTGGCACCAGAAGTTCTTGAACAGCGGAGGATGACTAGAAACCCTTCTGTCCCACCACAGTACGCCGCTAATAACTGTTCATATCCAAGAAGAAACTCATCCTGTAAAAATGAAAGGGCTGAAGATGAAGCCATTGAAGGTCCAAATGGGTTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGGTACTGA | 1704 | 42.66 | MQPDQRRKSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGDKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRRKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEYLDGSEPTGFMYPSAVDHFKKQFAFLEEHYGNGATVAPPERQHASLPRPCVLYSDNMVQNPAQVANDLSKCSIKEVERPPVDRTCNIPLTRVPIQVPQSIQAGNAARPGKVVGSVLRYNNCGVTAAAVAPEVLEQRRMTRNPSVPPQYAANNCSYPRRNSSCKNERAEDEAIEGPNGLQPKPQYIARKVAAAQGGPGNNWY | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 78479159 | 78485663 | + | Tan0010649.1 | Tan06g2580 | 757284 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g2580 | 567 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 55 | IPR017441 | GO:0005524(InterPro) | |
Tan06g2580 | 567 | Pfam | Protein kinase domain | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g2580 | 567 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 361 | - | - | |
Tan06g2580 | 567 | FunFam | Mitogen-activated protein kinase | 111 | 339 | - | - | |
Tan06g2580 | 567 | ProSiteProfiles | Protein kinase domain profile. | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g2580 | 567 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 339 | - | - | |
Tan06g2580 | 567 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g2580 | 567 | FunFam | Mitogen-activated protein kinase | 15 | 119 | - | - | |
Tan06g2580 | 567 | SMART | serkin_6 | 25 | 316 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g2580 | 567 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 22 | 357 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Tan06g2580 | 567 | MobiDBLite | consensus disorder prediction | 524 | 546 | - | - | |
Tan06g2580 | 567 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 320 | IPR011009 | - | |
Tan06g2580 | 567 | CDD | STKc_TDY_MAPK | 24 | 361 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0630 | Tan-Chr5:4684015 | Tan06g2580 | Tan-Chr6:78479159 | 9.80E-213 | dispersed | |
Tan06g1997 | Tan-Chr6:63993402 | Tan06g2580 | Tan-Chr6:78479159 | 3.70E-90 | dispersed | |
Tan06g2580 | Tan-Chr6:78479159 | Tan06g2582 | Tan-Chr6:78479159 | 1.70E-275 | dispersed | |
Tan06g2580 | Tan-Chr6:78479159 | Tan06g2581 | Tan-Chr6:78479159 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67819 | PF00069 | Pkinase | 7.30E-68 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g2580 | - | - | - | 0.0 |