Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2592 ATGGGTTGTATCCATACAAAATGTTGCTGTCGCTACCCAAAATCGTTGGTTGGTGAATCCCAAGATTTTCGGCAAGGGGTTCCTTTCTGTCTACAAGATAAGAACACTGTGATAGAGAGATCATTGGAGTATATTCCTGTGGCTTCTCACAACTATCATTTGGAATACTTGGTACTGGCTCAGCGTGGTTACTACCCTGAATCTCCTGAGAAAGAAAACCAAGACAGTTTCTGCATTAGAACAAATATTCAAGGTAACCCAAATGTCCATTTCTTTGGTGTTTTTGATGGGCATGGTCAATTTGGAATGCAGTGTTCAAATTTTGTGAAGGATAGGCTAATAGAAAAGCTATGTAATGATCCCACATTGTTAGATGATCCTGTAGAAGCTTATAATTCAGCATTTTTATCCACAAATGATGAGTTGCATACAAGTGAGATAGATGATTCCATGAGTGGAACAACTGCAATTACAGTCCTTGTTGTTGGGGATACCCTCTATGTAGCCAATGTGGGTGATTCAAGAGCTGTAATTGCAGTTAAAGAAGGGAATTGTGTCGTTGCCAAGGACTTGTCAAATGATCAAACGCCATTTAGAAAGGATGAGTATGAGAGAGTTAAGCTTTGTGGGGCCAGAGTTCTGAGTGTTGATCAAGTAGAAGGACTTGTGGATCCTGATATTCAGTGCTGGGGTGATGAAGAAAGTCAGGGCGGTGATCCGCCCCGACTGTGGGTTCAAAATGGGTTGTATCCTGGGACTGCATTTACCAGGAGCATAGGCGATAGTACTGCGGAGAAGATCGGTGTAAACGCCGTTCCTGAGGTTTTAGTTCTTCAGCTTAACCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGTCAAACTGTTGTCGATATGGCATCGAGTTATGCAGATCCTCAAGATGCATGTACTGCCATTGCTGCCGAGTCGTACAAACTATGGATGGAACATGAAAATCGTACCGATGATATAACGATCATTATTGTTCATATCAAAGGCTTGTCTAATGTATGA 1056 41.76 MGCIHTKCCCRYPKSLVGESQDFRQGVPFCLQDKNTVIERSLEYIPVASHNYHLEYLVLAQRGYYPESPEKENQDSFCIRTNIQGNPNVHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPVEAYNSAFLSTNDELHTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGNCVVAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEKIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIIVHIKGLSNV 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 78582916 78586517 + Tan0010425.1 Tan06g2592 757296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2592 351 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169(InterPro)
Tan06g2592 351 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Tan06g2592 351 SUPERFAMILY PP2C-like 46 347 IPR036457 -
Tan06g2592 351 SMART PP2C_4 56 343 IPR001932 -
Tan06g2592 351 Gene3D - 49 347 IPR036457 -
Tan06g2592 351 PANTHER PROTEIN PHOSPHATASE 60 343 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan06g2592 351 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Tan06g2592 351 CDD PP2Cc 71 345 IPR001932 -
Tan06g2592 351 Pfam Protein phosphatase 2C 72 323 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2695 Tan-Chr4:86458863 Tan06g2592 Tan-Chr6:78582916 1.70E-153 dispersed
Tan04g2696 Tan-Chr4:86473947 Tan06g2592 Tan-Chr6:78582916 8.90E-153 dispersed
Tan06g2592 Tan-Chr6:78582916 Tan09g1239 Tan-Chr9:64759072 1.80E-118 dispersed
Tan06g2592 Tan-Chr6:78582916 Tan02g0240 Tan-Chr2:2098199 2.50E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2592 - - - 0.0