Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2612 ATGAGGGCTTTAAATCACGGGTTCTCCATTTTTTATGTACTACTTCTTTGTATTCTCTTTACTTTTCAGGTCGTCAATGGCGCTCTGATAAATAATTTCTATAGGAAAAGTTGCCCCCAAGCTGAGAGAATTATCAAGAACGTCACCTTTCGACTCACTCAATCGAATCGTGCTCTCGGAGCACAACTCTTGAGAGTCCAATTCCATGACTGCTTTGTTCAGGGATGTGATGCATCAATTCTTTTAGATACCGTCGGAGGGGAAAAGGAAGCAAGGCCAAATCTATCACTGTTAGGATTCGATGCGATTGACACTATCAAGTCGGAGGTTGAGAAGGCTTGCCCTAGAGTTGTTTCTTGCTCCGACATTCTCGCCCTTGCCGCTCGTGACGCTGTTTCATTTCCGTTCAAAAACCGGCCACTTTGGCCAGTCTTGACCGGAAGAAGAGACGGAACGGTTTCTCGATCATCAAATGTCACCGGAAATATCCCGTCGCCGTTCTCCGATTTCGCTACTCTTAAGCAAGTCTTCGAGAAGAAAGGCCTTACCGTGAGCGATCTGGTGATTTTATCAGGTGGGCATACAATTGGAGTAGCTCATTGTGGCACATTCTCAAGGAGGCTTTACAACTTCACAGGCAAAGGAGATGCAGATCCTTCATTAAATCCAATATACGCCAACACTCTTAGAAGACAATGTCCAAATCCAGCTGACCCTTCAATCACAATAGAAATAGATCCAAGAAGTTCACGTTCATTTGACAGTAACTATTTCAAAATCCTCACACAGCAAAAGGGTTTATTTCAATCCGACGCCGTGCTTCTCACCGATCGTTCGTCGTCTCGGGTCGTCAAACAGTTGCAGAATCCGAGAGCTTTCTTCTTGAGCTTTGCTAATTCCATGTTGAAGATGGCTGCCATTGACGTCCTCACTGGAACTGATGGTGAAATTAGAGAACAATGCCGTTTTGTTAATTGA 978 44.48 MRALNHGFSIFYVLLLCILFTFQVVNGALINNFYRKSCPQAERIIKNVTFRLTQSNRALGAQLLRVQFHDCFVQGCDASILLDTVGGEKEARPNLSLLGFDAIDTIKSEVEKACPRVVSCSDILALAARDAVSFPFKNRPLWPVLTGRRDGTVSRSSNVTGNIPSPFSDFATLKQVFEKKGLTVSDLVILSGGHTIGVAHCGTFSRRLYNFTGKGDADPSLNPIYANTLRRQCPNPADPSITIEIDPRSSRSFDSNYFKILTQQKGLFQSDAVLLTDRSSSRVVKQLQNPRAFFLSFANSMLKMAAIDVLTGTDGEIREQCRFVN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 78687832 78690892 - Tan0006010.1 Tan06g2612 757316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2612 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 FunFam Peroxidase 164 304 - -
Tan06g2612 325 SUPERFAMILY Heme-dependent peroxidases 30 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 CDD secretory_peroxidase 32 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan06g2612 325 Gene3D Peroxidase, domain 2 164 304 - -
Tan06g2612 325 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PANTHER PEROXIDASE 25-RELATED 30 321 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan06g2612 325 FunFam Peroxidase 32 176 - -
Tan06g2612 325 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 Gene3D - 32 325 - -
Tan06g2612 325 Pfam Peroxidase 47 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g2612 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0320 Tan-Chr2:2632345 Tan06g2612 Tan-Chr6:78687832 2.50E-74 dispersed
Tan06g2612 Tan-Chr6:78687832 Tan03g2030 Tan-Chr3:75315168 4.50E-68 dispersed
Tan06g2612 Tan-Chr6:78687832 Tan05g0860 Tan-Chr5:6743085 1.20E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2612 K00430 - csv:101215642 506.523