Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2626 ATGGCGCCTGAAATGATTGTCGAATCAGGCTCGTCGATAGTGGATTTTGGGATGGAGCTAGTCGCGGATCATACTTCGGTTGTTTCTTTAAACTTATTTGTAGCTCTTCTTTGCGGTTGCATTGTTATCGGCCATTTGTTAGAGGAAAATCGATGGATCAACGAGTCCATTACAGCCCTTGTCATTGGATTGTGTACCGGCATCATAATATTGCTAACAACTAGAGGGAAAAGCTCGCATTTATTTTTGTTCAATGAGGAGCTTTTCTTTATTTATCTCCTTCCGCCTATCATTTTCAATGCCGGGTTCCAGGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCCAGAAAATGAATATCGGTTCCCTTGATCTTGGAGATTATCTAGCTATTGGAGCCATTTTTTCTGCAACAGACTCTGTTTGCACCTTACAGGTTCTTAATCAGGATGAGACCCCTCTTCTGTATAGCCTGGTTTTTGGGGAGGGTGTTGTAAATGATGCCACATCGGTTGTGCTATTCAATGCAATCCAGAACTTTGACCTTTCTCACATGAATTCTAGCATCGTTCTGCAATTCATTGGGAACTTTTTGTATCTGTTTATTGCAAGTACTGTGCTGGGAATTTTAGTTGGCCTCCTTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGTGAAGTTGCTCTTATGATACTCATGGCGTATTTCTCCTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTCATGTCTCACTATACATGGCATAACGTGACTGAAAGTTCCAGAGTTACTACAAAGCATGCTTTTGCCACTCTTTCATTTGTTGCTGAGATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTTGATATTGAGAAGTGGAGATTTGTTAGCCACAGTCCTGGGAAATCCATTGGGGTGAGCTCAATACTGTTGGGATTGGTTCTGGTTGGAAGAGCAGCCTTCGTTTTTCCATTATCCTCCTTGTCCAATCTGACCAAGAAGTCCTCGCATGAAAAACTCAACTTGGAACAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGTGCCGTTTCAATGGCACTTGCATATAATCAGTTCACCAGGTCAGGCCACACCCATTTACCAGGCAATGCAATCATGATCACCAGTACCATCACAGTTGTTCTTTCCAGTACAGTGGTATTTGGAATGATGACAAAACCCCTAATAGGGATTTTGCTACCCCAACCAAAATGCACAATGAGCATGGTCTCATCCGAACCGTCTTCCCCAAAATCGTTCACAGTCCCACTCCTGACAAATGACCCAAACAGCCCTTCCCCTTTGGGCCTGTTCCTCCGAATCCCGGCCCATACGGTTCATCATTATTGGCGGAGATTCGACGACGCCTTCATGCGCCCTGTCTTTGGAGGACGGGGCTTTGTTCCCTTCGTCCCAGGCTCCCCTACCGATGACCCCTCTCAACAATGGCAAATTACTGAGGGAGTTCTGGAATCCGCCATTGATGACAATAAAACCATTCTTATACAAACTCAAAGATAA 1671 43.57 MAPEMIVESGSSIVDFGMELVADHTSVVSLNLFVALLCGCIVIGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFQKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIVLQFIGNFLYLFIASTVLGILVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSSLSNLTKKSSHEKLNLEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAIMITSTITVVLSSTVVFGMMTKPLIGILLPQPKCTMSMVSSEPSSPKSFTVPLLTNDPNSPSPLGLFLRIPAHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPTDDPSQQWQITEGVLESAIDDNKTILIQTQR 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 78825591 78833226 - Tan0021015.1 Tan06g2626 757330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2626 556 PANTHER SODIUM/HYDROGEN EXCHANGER 26 533 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Tan06g2626 556 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g2626 556 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g2626 556 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g2626 556 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g2626 556 Pfam Sodium/hydrogen exchanger family 34 445 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan06g2626 556 Gene3D - 150 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3145 Tan-Chr1:84949977 Tan06g2626 Tan-Chr6:78825591 2.80E-168 transposed
Tan05g1830 Tan-Chr5:62027373 Tan06g2626 Tan-Chr6:78825591 3.20E-47 transposed
Tan09g0361 Tan-Chr9:33754532 Tan06g2626 Tan-Chr6:78825591 1.00E-218 transposed
Tan06g0891 Tan-Chr6:7520389 Tan06g2626 Tan-Chr6:78825591 2.20E-200 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2626 - - - 0.0