Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2709 ATGGGATCGGAACAGTTGATGGCCGGAGGCGGGCCTCGATACGTTCAAATGCAATCGGAGCCGCCTACGGCTTCGATGTCGTCGTTTTTCTCGTTTCATCACGACGCTCCTGAGCCGACGAGGATTTTCGATGAGTTGCCGAAGGCCACAATTATTTCCGTTTCTCGGCCTGATGCCGGCGATATTAGTCCGATGCTCCTTTCTTACACAATCGAGTGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTCTATTTGCATTTCGCATTAAAGAAACGGGCATTCATTGAGGAAATCCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACAACAGTGCTCCAAGATGAGGATGGACCAGATGATGAGGCTGATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCATCGAGTGCTGCTCTGCCTATCATTCGGCCTGCCTTAGGAAGGCAGCAGTCTATGTCTGATAGAGCTAAGAATGCAATGCAAGGGTATCTGAATCACTTCTTGAGTAACATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATATGGCCCAAAGTTGAAAGAGGATTATGTCATGGTGAAGCATCTACCTAAAATCGCAAAGGAAGATGACTCTAGGAAATGTTGTCTATGCCTATGGTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGATTTTTGGCCTTGTTGGGAGATCCTTTTGATACTCAACCAATGGATATAATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGATGGACGAGTATCTTTGGCTAAGGAAATTAAGGAGCGAAATCCTTTACGGCATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATAAGAGCAAAGAACGGATCCAAGGTTAAAGACTGGGTTGCTGCAATTAATGATGCGGGACTGAGGCCTCCTGAGGGCTGGTGTCATCCTCACCGTTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACTGACGATGGTAGTAAGGCTCAGTGGTTCATCGATGGTCAAGCAGCTTTTGAAGCTATTGCCTTTTCCATTGAACGTGCAAAATCGGAGATTTTCATTTGCGGCTGGTGGCTTTGCCCAGAATTGTATCTGCGGCGTCCTTTTATCTCAAATGCTTCATCTAGGCTCGATGCTTTACTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAAATTAACAGTGTTTATAGCAAGAGAAAACTTCTTGGCATCCATGAGAATGTGAGAGTATTACGCTACCCCGACCACTTCTCCAGTGGTGTTTACTTATGGTCCCACCATGAAAAACTTGTCATTGTCGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGCTATGATACACCAGAACATAAAGTTGGTGATTGTCCTCCTTCAGTATGGCCAGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGACACCATGAAAGATGAGTTGGTGCGCGGGAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCATGTCGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATAACCCAGAGTTGGAGGTTGAAAAGAAGAGTTTTGACGATTCTAAAGGATCAACAGTACAGGATTCCTTTTCTCGAGGATCATCTTTTCACGATATTCCGTTGCTTTTGCCTCAAGAGGCTGATGGACAGGATGCTCAAAATGAAGGTCCAAAATTAAATGGACTGGAGCCCATTGCTAATCCCCTTGATCAGCCGAGTAAGATCAGCAGCAGTCTCTCGTTCTCTTTTAGGAAGATCAAAGTTGAACCCGTAGGACCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTTGACTATTTGGATTCCCATGGAAAATCGTCCGGAGATGGGAAATTGCATCATCGTGTCAAAAGTTCAGATTTAGAGTGGTGGGAAACACAAGATAGGGGACATCATGGTGGCTTCACTGATGAGTCTGGACAAGTTGGTCCGTGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAGTGGTCTGCTGGGACGAGCCAAACTGAAGAGAGCATTCACATTGCATATTGCTCTCTTATTGAGAAAGCAGAACATTTCATCTATATTGAGAATCAATTTTTTATATCAGGCCTCTCAGGAGATGATTCAATACGAAATCGTGTGTTAGAAGCATTATACCGCCGCATAATGAGAGCTTACCGTGAAAAGAAGACTTTTAGGGTTATTATTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGATGACAGTGGTGCAGCATCAGTTAGAGCTATAATGCATTGGCAGTATCGAACTATATGTCGAGGACAGAATTCGATATTCCATAATCTTTGTGATCTTCTTGGTTCAAAAGTTCATGATTATATATCGTTCTATGGCCTCAGAGCTTATGGTAGACTCTTTGATGGTGGTCCTGTGGCTACAAGCCAGGTGTACGTTCATAGTAAAATTATGATCATCGACGATTGTATTGCTTTGATTGGGTCGGCTAACATCAACGACCGGAGTTTGCTTGGTTCTAGGGATTCTGAGATTGCTATTGTTATTGAAGATAACGAACTTATCAATTCATATATGGGAGGGCAACCATGGAAAGCGGGAAAGTTTTGTTGGAGTCTTCGTCTCTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCTGGACAGATCAATCAAATAGTTGACCCAGTTGCTGATTCAACCTACAAGGATACATGGATGGGAACTGCTAAGACGAACACGACGATATACCAAGATGTTTTTTCTTGCCTACCAAACGACCTCATAAATTCCAGAGCTGGACTGAGACAAAGCGTTGCGTTCTGGAAAGAGAGACTGGGGCACACCACAATAGATTTAGGAATTTCACCTGAGAGGCTTGAGTTTTACAAGAATGGAGAAATTGAAAGGATTGATCCAATGGAGAGATTAAGTTCAGTGAAGGGGCATCTTGTTTCATTCCCATTGGAATTCCTCAGCAAAGAAGATTTAAGACCTGTGTTCAATGAAAGTGAGTATTATGCATCTCAAGTTTTTCATTAA 3342 43.09 MGSEQLMAGGGPRYVQMQSEPPTASMSSFFSFHHDAPEPTRIFDELPKATIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTVLQDEDGPDDEADPLHHDESSKNRDVPSSAALPIIRPALGRQQSMSDRAKNAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAKEDDSRKCCLCLWFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDGQAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMKDELVRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNNPELEVEKKSFDDSKGSTVQDSFSRGSSFHDIPLLLPQEADGQDAQNEGPKLNGLEPIANPLDQPSKISSSLSFSFRKIKVEPVGPDMPLKGFVDDLDYLDSHGKSSGDGKLHHRVKSSDLEWWETQDRGHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIFHNLCDLLGSKVHDYISFYGLRAYGRLFDGGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELINSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVADSTYKDTWMGTAKTNTTIYQDVFSCLPNDLINSRAGLRQSVAFWKERLGHTTIDLGISPERLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79497338 79508393 + Tan0006506.1 Tan06g2709 757413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2709 1113 CDD PLDc_vPLD1_2_yPLD_like_2 770 954 - -
Tan06g2709 1113 SUPERFAMILY Phospholipase D/nuclease 750 959 - -
Tan06g2709 1113 Coils Coil 98 118 - -
Tan06g2709 1113 CDD PLDc_vPLD1_2_yPLD_like_1 370 515 - -
Tan06g2709 1113 SUPERFAMILY PH domain-like 246 340 - -
Tan06g2709 1113 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Tan06g2709 1113 SMART pld_4 910 937 IPR001736 GO:0003824(InterPro)
Tan06g2709 1113 SMART pld_4 477 504 IPR001736 GO:0003824(InterPro)
Tan06g2709 1113 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824(InterPro)
Tan06g2709 1113 Gene3D - 243 340 IPR011993 -
Tan06g2709 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824(InterPro)
Tan06g2709 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 910 937 IPR001736 GO:0003824(InterPro)
Tan06g2709 1113 SUPERFAMILY Phospholipase D/nuclease 322 597 - -
Tan06g2709 1113 PANTHER PHOSPHOLIPASE D 172 1094 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan06g2709 1113 FunFam Phospholipase 744 964 - -
Tan06g2709 1113 CDD PH_PLD 193 340 - -
Tan06g2709 1113 SMART PH_update 216 344 IPR001849 -
Tan06g2709 1113 Gene3D Endonuclease Chain A 363 602 - -
Tan06g2709 1113 Gene3D Endonuclease Chain A 735 967 - -
Tan06g2709 1113 PIRSF PLD_euk 34 629 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan06g2709 1113 PIRSF PLD_euk 671 1113 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan06g2709 1113 Pfam PLD-like domain 912 959 IPR025202 -
Tan06g2709 1113 MobiDBLite consensus disorder prediction 127 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2132 Tan-Chr6:70585955 Tan06g2709 Tan-Chr6:79497338 8.70E-31 dispersed
Tan06g2133 Tan-Chr6:70585955 Tan06g2709 Tan-Chr6:79497338 8.70E-31 dispersed
Tan06g2709 Tan-Chr6:79497338 Tan08g0618 Tan-Chr8:6290114 0.00E+00 dispersed
Tan06g2709 Tan-Chr6:79497338 Tan02g2720 Tan-Chr2:95496371 3.50E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2709 K01115 - csv:101211856 2156.72