Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2710 ATGGTGAGAAATATGTCGGTAAAGAAAAAGAATAATGATGAAGAAGGCGGCAAAGAAGCGGCTCGAGAAATGGCGAAAGAGGCAAAAAGGAACAAATCGATGAATTGTTTATCAGGAAGTGTTGAAACAAGCAGGTTTGATGATATGTCTTCTGTTTGCTCCAAGAGAGGAAATAAAGGAATTAATCAAGATTCCTTGGTTGTCTGGGAGGACTATGGTTGCCAAGAAGACATGGTTTTCTGTGGGATCTTTGATGGACATGGTCCTTGGGGCCACATGGTTAGCAAACAGGTCAGAAAGTCGCTGCCTGCGCAATTACTGACCAATTGGCAACAAAACCTTTCGATATTGGAAGCCAACCAAAACCTTCTAATTCCTTCCAAAATATGGAAGCAATCTTGCTTAAAAACATACGCCGCCATTGATGAGGAGCTCAAGCAACACCCTCGCATTGATTCTTTTTACAGTGGCACAACGGCTTTGACAGTGGTTAAACAGGGCCGACATCTTGTGGTTGCAAATGCTGGCGATTCACGAGCTGTGTTAGCTGTAACTTCTGAGGACGATGGCTGCTTGAAACCAGTTCAACTCTCTGTTGATTTCAGACCTAATTTACCTGAGGAGGCTGAGAGAATAAAACAATCGAAAGGGCGAGTGGTATGTTTAAAAGATGAACCAGGCGTTTACAGAGTGTGGACTCCCAACGCAGGGACGCCTGGTTTGGCAATTTCCAGAGCATTTGGAGATTACTGCACCAAACAGTACGGCCTCATTTCTGTGCCTGATGTTACCCACCGAATCATTACCACTCAAGATCAGTTTGTCATTGTGGCCACTGATGGGGTTTGGGACGTCATGTCGAATCATGAAGCAATTCGCATAGTTTCTTCAACGACAAATAGGGAAATGTCGGCCAAAAGGCTAGTGGATTGTGCTGCTCTTGCATGGAAATCCAAGAAACGAGGCATTGCAAGGGACGACATATCGGCCATTTGCCTCTTTTTTCATGCTTCATCCTCAGAAAATCATTGA 1032 44.38 MVRNMSVKKKNNDEEGGKEAAREMAKEAKRNKSMNCLSGSVETSRFDDMSSVCSKRGNKGINQDSLVVWEDYGCQEDMVFCGIFDGHGPWGHMVSKQVRKSLPAQLLTNWQQNLSILEANQNLLIPSKIWKQSCLKTYAAIDEELKQHPRIDSFYSGTTALTVVKQGRHLVVANAGDSRAVLAVTSEDDGCLKPVQLSVDFRPNLPEEAERIKQSKGRVVCLKDEPGVYRVWTPNAGTPGLAISRAFGDYCTKQYGLISVPDVTHRIITTQDQFVIVATDGVWDVMSNHEAIRIVSSTTNREMSAKRLVDCAALAWKSKKRGIARDDISAICLFFHASSSENH 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79512874 79518118 + Tan0014643.1 Tan06g2710 757414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2710 343 CDD PP2Cc 49 335 IPR001932 -
Tan06g2710 343 ProSiteProfiles PPM-type phosphatase domain profile. 49 335 IPR001932 -
Tan06g2710 343 PANTHER PROTEIN PHOSPHATASE 31 334 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan06g2710 343 SMART PP2C_4 39 333 IPR001932 -
Tan06g2710 343 MobiDBLite consensus disorder prediction 1 33 - -
Tan06g2710 343 SUPERFAMILY PP2C-like 49 336 IPR036457 -
Tan06g2710 343 MobiDBLite consensus disorder prediction 1 30 - -
Tan06g2710 343 Gene3D - 15 338 IPR036457 -
Tan06g2710 343 Pfam Protein phosphatase 2C 73 312 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2710 Tan-Chr6:79512874 Tan08g0623 Tan-Chr8:6323195 3.20E-120 dispersed
Tan06g2710 Tan-Chr6:79512874 Tan06g2711 Tan-Chr6:79512874 2.60E-199 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2710 - - - 0.0