Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2711 ATGGTGCTGTTTCCGGCAGTTATTGAAGGAATGGTGAGAAATATGTCGGTAAAGAAAAAGAATAATGATGAAGAAGGCGGCAAAGAAGCGGCTCGAGAAATGGCGAAAGAGGCAAAAAGGAACAAATCGATGAATTGTTTATCAGGAAGTGTTGAAACAAGCAGGTTTGATGATATGTCTTCTGTTTGCTCCAAGAGAGGAAATAAAGGAATTAATCAAGATTCCTTGGTTGTCTGGGAGGACTATGGTTGCCAAGAAGACATGGTTTTCTGTGGGATCTTTGATGGACATGGTCCTTGGGGCCACATGGTTAGCAAACAGGTCAGAAAGTCGCTGCCTGCGCAATTACTGACCAATTGGCAACAAAACCTTTCGATATTGGAAGCCAACCAAAACCTTCTAATTCCTTCCAAAATATGGAAGCAATCTTGCTTAAAAACATACGCCGCCATTGATGAGGAGCTCAAGCAACACCCTCGCATTGATTCTTTTTACAGTGGCACAACGGCTTTGACAGTGGTTAAACAGGGCCGACATCTTGTGGTTGCAAATGCTGGCGATTCACGAGCTGTGTTAGCTGTAACTTCTGAGGACGATGGCTGCTTGAAACCAGTTCAACTCTCTGTTGATTTCAGACCTAATTTACCTGAGGAGGCTGAGAGAATAAAACAATCGAAAGGGCGAGTGGTATGTTTAAAAGATGAACCAGGCGTTTACAGAGTGTGGACTCCCAACGCAGGGACGCCTGGTTTGGCAATTTCCAGAGCATTTGGAGATTACTGCACCAAACAGTACGGCCTCATTTCTGTGCCTGATGTTACCCACCGAATCATTACCACTCAAGATCAGTTTGTCATTGTGGCCACTGATGGGGTTTGGGACGTCATGTCGAATCATGAAGCAATTCGCATAGTTTCTTCAACGACAAATAGGGAAATGTCGGCCAAAAGGCTAGTGGATTGTGCTGCTCTTGCATGGAAATCCAAGAAACGAGGCATTGCAAGGGACGACATATCGGCCATTTGCCTCTTTTTTCATGCTTCATCCTCAGAAAATCATTGA 1062 44.44 MVLFPAVIEGMVRNMSVKKKNNDEEGGKEAAREMAKEAKRNKSMNCLSGSVETSRFDDMSSVCSKRGNKGINQDSLVVWEDYGCQEDMVFCGIFDGHGPWGHMVSKQVRKSLPAQLLTNWQQNLSILEANQNLLIPSKIWKQSCLKTYAAIDEELKQHPRIDSFYSGTTALTVVKQGRHLVVANAGDSRAVLAVTSEDDGCLKPVQLSVDFRPNLPEEAERIKQSKGRVVCLKDEPGVYRVWTPNAGTPGLAISRAFGDYCTKQYGLISVPDVTHRIITTQDQFVIVATDGVWDVMSNHEAIRIVSSTTNREMSAKRLVDCAALAWKSKKRGIARDDISAICLFFHASSSENH 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79512874 79518118 + Tan0014643.2 Tan06g2711 757415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2711 353 CDD PP2Cc 59 345 IPR001932 -
Tan06g2711 353 Pfam Protein phosphatase 2C 83 322 IPR001932 -
Tan06g2711 353 Gene3D - 20 348 IPR036457 -
Tan06g2711 353 MobiDBLite consensus disorder prediction 19 40 - -
Tan06g2711 353 PANTHER PROTEIN PHOSPHATASE 41 344 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan06g2711 353 ProSiteProfiles PPM-type phosphatase domain profile. 59 345 IPR001932 -
Tan06g2711 353 SUPERFAMILY PP2C-like 59 346 IPR036457 -
Tan06g2711 353 SMART PP2C_4 49 343 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2711 Tan-Chr6:79512874 Tan08g0623 Tan-Chr8:6323195 7.70E-122 dispersed
Tan06g2710 Tan-Chr6:79512874 Tan06g2711 Tan-Chr6:79512874 2.60E-199 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2711 - - - 0.0