Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2722 ATGGATCTGAGCCACATGAAGGGATCGATGCCGACGCCGACTTCAATTTCTGCTAGAAAAGCCACTGAAATGGTTTCTGATCAGTTCCCGGCGGGTCTTCGCGTCCTGGTTGTGGACGATGATCCTACCTGTCTCAGGATCTTGGAAAAGATGCTTCAGAATTGCTGCTATGCAGTGACAAAATGTAATCGGGCGGAGATTGCATTGTCCATGCTTCGTGAGAACAAAAACGGGTTTGATATTGTCTTAAGCGACGTGCATATGCCAGACATGGATGGATTCAAACTTCTAGAGCAAGTTGGTTTGGAGATGGATTTGCCTGTGATCATGATGTCAGCAGATGATGGGAAGAATGTTGTGATGAAGGGAGTGATTCATGGTGCTTGCGATTACCTGATCAAACCTGTTCGAATTGAAGCACTCAGGAACATATGGCAACATGTAGTTCGGAAGAGAAAGACCGAATGGAAGGATTTAGAGCAATCTGGGAGCGTGGAGGATGGAGATCGAGAGCAAAATCCATCTGAAGGTGCAAATTATTCATCTTCGGCATATGAAGGGAGTTGGAACAGCTCAAAGAGGAGGAGGGATACAGAAGAAGAGGCCGAGGAGAGGGATGATACATCAACTTTAAAGAAGCCCAGGGTGGTATGGTCGGTTGAGCTCCATCAACAGTTTGTCGCCGCAGTTAATCAGCTAGGCATTGACAAGGCTGTTCCTAAAAAAATATTGGAGTTGATGAACGTTCCGGGGCTTACTCGAGAAAATGTTGCCAGTCACCTTCAGAAATATCGCTTATATCTTAGAAGGCTTAGTGGAGTATCGTCGTCACACTCACACCAATGTAATTTGAACAATTCTTTTATGAACCCCCAAGACCCACCTTTTGGGCCAATGGCCTCATTCAATGGGATTGATCTTCAGACGCTTTCAGTCACCGGCCATCTCTCGCCTCAAAGTCTTGCTGCACTCCAAGCAACCGGACTTCGTAGGCCTACTACAACAAAATCTAGCATATCCATGGCCCTTGTTGATCAGAACAACCTATTCAGCTTTGAAAATCCAAAATTGAGGTTTGGTGAGGACCAAACACAGCACTTAAATAACAGTAAACCAGTAAACTTGTTTCATGGGATTCCAACGAAAATGGAGCCAAAGCAGCTTGCCAATATGCACCCTTCTGTGCAGACTCAGGGGAGCATAAACATGCCACTCAATATCAAGACTGAACATGGTGGAACTCAACTAATGCATTTGTCTCAACAGCAAACTGGAGGACAGACTCTAAATAACTCTCCTGCTAGCCACTTACCCAGAATTCCATCGACAATAAGGAAACCGATCATATCAGGTACCATTACGAGGGGAAATGGGACTGCTGATAATACTCAAGGACTGGGATACAACCTAGTTTCGCCAGCATCGTTGATGGTGAGCTTTCCAATGAACCAACCCGCAGAATTGTCAAACAATTTTTCTCTTCAGAGTGATTCGATGGTATCTACCCTGACTTGTAAAGGGGTGTTTCAAGAAGAGATTAGTTCAGGTCTAAAAGGATCGGGCGGACTAATGTCGAGCTATGATGTTTTTAATGACTTGCATCTGCAGAAATCCCATGACTGGGATTCTCAGAATGTAAGCAGCTTGGCCTTTGGTACTTCTCACCATGGGAACTTCATACAGGATAGCTTTGATGTCTCACCCTCAACTTTAATTCATCATGATTTTCCTTCAAGCCAAACGAATGGACAAAATCAAAATTCATCCGTCGTTGGAAAGACTATCTTTTCCTTTTCGGATGCAACTCAACCTGAGAATGCGCAAAGTAACGCCCAAAACTCGCTTCTCAATCCCGTGGAGGTCAAACCTCAGAGAATCCCTGATGCATGCTATCAAACTGACCTCTTATCTGAGAACTTTGGCCAGGATGAACTTCTTAGTGTTATCCTCAAACAACAACAACAAGAAGACAACGGATCAGTTGACTTTAATGGATACCAAACGGAGAATATTTGCGTTTAG 2022 44.31 MDLSHMKGSMPTPTSISARKATEMVSDQFPAGLRVLVVDDDPTCLRILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNIWQHVVRKRKTEWKDLEQSGSVEDGDREQNPSEGANYSSSAYEGSWNSSKRRRDTEEEAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSSSHSHQCNLNNSFMNPQDPPFGPMASFNGIDLQTLSVTGHLSPQSLAALQATGLRRPTTTKSSISMALVDQNNLFSFENPKLRFGEDQTQHLNNSKPVNLFHGIPTKMEPKQLANMHPSVQTQGSINMPLNIKTEHGGTQLMHLSQQQTGGQTLNNSPASHLPRIPSTIRKPIISGTITRGNGTADNTQGLGYNLVSPASLMVSFPMNQPAELSNNFSLQSDSMVSTLTCKGVFQEEISSGLKGSGGLMSSYDVFNDLHLQKSHDWDSQNVSSLAFGTSHHGNFIQDSFDVSPSTLIHHDFPSSQTNGQNQNSSVVGKTIFSFSDATQPENAQSNAQNSLLNPVEVKPQRIPDACYQTDLLSENFGQDELLSVILKQQQQEDNGSVDFNGYQTENICV 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79583258 79594532 + Tan0001611.1 Tan06g2722 757426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2722 673 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160(InterPro)
Tan06g2722 673 MobiDBLite consensus disorder prediction 190 210 - -
Tan06g2722 673 PIRSF RR_ARR_type-B 15 663 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Tan06g2722 673 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Tan06g2722 673 MobiDBLite consensus disorder prediction 174 189 - -
Tan06g2722 673 Pfam Response regulator receiver domain 35 143 IPR001789 GO:0000160(InterPro)
Tan06g2722 673 FunFam Two-component response regulator 209 272 - -
Tan06g2722 673 SMART REC_2 33 145 IPR001789 GO:0000160(InterPro)
Tan06g2722 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 369 IPR045279 GO:0009736(InterPro)
Tan06g2722 673 Gene3D - 33 166 - -
Tan06g2722 673 MobiDBLite consensus disorder prediction 156 173 - -
Tan06g2722 673 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Tan06g2722 673 SUPERFAMILY CheY-like 32 156 IPR011006 -
Tan06g2722 673 Gene3D - 210 272 - -
Tan06g2722 673 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 269 IPR017930 -
Tan06g2722 673 MobiDBLite consensus disorder prediction 156 210 - -
Tan06g2722 673 CDD REC_typeB_ARR-like 35 149 - -
Tan06g2722 673 FunFam Two-component response regulator 33 170 - -
Tan06g2722 673 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2722 Tan-Chr6:79583258 Tan10g1051 Tan-Chr10:9414877 6.60E-215 dispersed
Tan06g2215 Tan-Chr6:72585549 Tan06g2722 Tan-Chr6:79583258 7.00E-42 transposed
Tan10g1050 Tan-Chr10:9414877 Tan06g2722 Tan-Chr6:79583258 1.60E-213 wgd
Tan06g0759 Tan-Chr6:5946825 Tan06g2722 Tan-Chr6:79583258 5.80E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27854 PF00072 Response_reg 7.70E-22 CL0304 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2722 K14491 - csv:101210138 1146.72