Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2739 ATGTCTCTCTCTATGAAAGCTGACGTTCAAGGAAACCTTGTGGGCTCGGAGATTCATGGCTTCCATACATTGCAAGATTTGGATGTTAAAAACATCAGGGAGGAAGCAAGTGCAAGATGGCTTCGCCCAAATGAAATCCATGCAATACTATGTAACTACAAATATTTCGTCATCCACGTTAAGCCAGTGAACTTGCCCAAAAGTGGAACCATTGTACTATTTGACCGCAAGATGCTTAGGAATTTCCGGAAAGATGGACATAATTGGAAGAAAAAAAAGGACGGGAAGACAGTAAAAGAAGCGCATGAACACCTAAAAGTTGGTAATGTAGAAAGGATACATGTATACTATGCTCATGGCCTAGATAACCCAACCTTTGTTCGCCGGTGTTATTGGCTCCTTGATAAGACTCTTGAACACATTGTCCTCGTTCATTACCGTGAAACACAAGAGAATTCTCCATCCGCATCTATAAATTCAAATTCTGGTTGTGTCTCTGACATATCAACTCCTCAGCTTTTATCGGAAGAACTTGATTCTAGGGCTAATCATGTTTATTCTGTTGGTGAAAATGAACTGTCAGAGCCTAGTGACACTACAACAGTCATGAATCATGAACAACGGCTTCATGAGATCAACACACTTGAGTGGGATGAACTTCTTGTAACAAATGAACCTTTCAAACCTGCCATGCCTAAAGGAGACAGACCTTCATACTTTGACCAACGGAACCAAGTTGCAATAAATGTGGCCAACAATTTATTGGGGGACATGTCTTCGTTTAATAATCCAGTTGAGTCAACTGAGAGTGCTGACGGCACTATCAGTTTTACAGGGAGTGCCTATATGCCGATAATGCGTGGTCAGAAAAATTTGAATGTAGAGACTAAGGAATCCATTCCAATTACTTCATTGGACAATTTGTTAAATGATGGATTGCAAAGTCAGGACAGCTTTGGACGATGGATAAATGAAGTCTTCACTGAGTCTCCGGGTACAGTCATTGATCCTGCTATTGAGCCATCCATTTCATCCATTCACAATTCCTATACTGATCCGACATTAGATCACCGTCAACCTTCTGTTATGGAGCAAATTTTTAACATAACCGATGTCTCACCTGCATGGGCCTTTTCAACAGAAAAAACAAAGATTCTAATCACTGGATATTTTCACAATGATTTTGTACATCTCGCAAAGTCCAATATATTGGTAGTGTGTGGTAATACTAGTGTTAATGCTGATTTTATTCAACCTGGAGTTTATCGCTGTCTGGTACAACCACATTCAACAGGACTAGTACAATTATACGTGAGCTTAGATGGTCACAAACCTATAAGTCAAGTTTTGAATTTTGAGTATCGTGCACCACTTTTACAAGAGCCTGTAGTTGCTTCAGAACAGATCCAAAAGTGGGAAGAGTTTCAAGTTCAGATGCGGCTTGCTTATCTGTTGTTCTCTACATCCAAAAGCCTGAGCATCATGTCAACCAAATTGTCACCCATTGCCCTGAATGAGGCCAGGAAATTTGCTGTCAAAACTTCTGACATTTCTGATAGTTGGATTTATTTGTTAAACTCAATTAAAGAAAATAACACTCCATTTCCACAAGCAAGAGAGGGGGTTCTTGAGATCATTTTGAGAAGCAGGTTAAGGGAATGGCTGATAGAAAGAGTTGCTGAAGGCTCAAAGAAAAGCACTGATTTTGATGTCAAAGGTCAAGGAGTAATCCATTTGTGTGCCATATTAGGATATACCTGGGCTATATATCTATTTGCCTGGTCTGGTTTATCAATAAATTTTCGAGATAAATTTGGATGGACAGCTCTTCACTGGGCAGCTTATTATGGAAGGGAGAAAATGGTAGCAGTTCTTTTATCAGTGGGGGCGAAGCCGAACTTGGTCACCGATCCCTCATCAAGGAACCCTCTGGGATGTACCGCTGCAGATCTTGCATCTATGAATGGTTATGATGGCTTATCTGCTTATCTTTCTGAAAAGGCTTTGGTATCACATTTTAATGAGATGAGCTTGGCTGGAAATGTTAGTGGTTCATTGGAAACTAGTACAACAACCGATGCCAGTTACCCAGATAGCATCAGTGAGGAGCAGATGTATATGAAAGAAACATTAGCAGCTTACCGAACAGCAGCTGATGCAGCAGCACGCATACAAGCTGCATTCCGTGAGCATTCTTTAAAGCAAAGGACTCAAGCAATTGAATTCTCCACCCCTGAAGATGAAGCACGTGGTATTATTGCAGCCATGAAAATTCAACATGCCTACCGCAACTTTGAGACGCGAAAAAGAATGGCAGCTGCTGCTCGTATTCAATACAGATTCCGCACTTGGAAGATCCGCAAAGACTTCCTTAATATGCGCCGTCAAGCTATTAGAATTCAAGCTGCATTTAGAGGCTTCCAAGTGCGGAGGCAGTATCGTAAGATTGTATGGTCGGTAGGAGTACTCGAGAAAGCTATACTGCGCTGGCGTCATAAGAGAAAAGGCTTTCGTGGCCTTCAAGTTGCACCTGCTGAAGTGACAGAACAGCCTGAAATTGGCATAGTGGAGGTAGAGGACTTCTACCGTGTGTCTCAAAAACAAGCAGAAGAGCGAGTTGAGAAAGCTGTTGTACGGGTTCAGGCCATGTTTCGATCAAAGAAAGCACAAGAGGAGTATCGGAGGATGAAGTTAACCTACGATGAAGCAGCGCTGGAATATGAAGAACTTTCACATCCTGATATGAAATTGAGTCACTGA 2760 41.56 MSLSMKADVQGNLVGSEIHGFHTLQDLDVKNIREEASARWLRPNEIHAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRRCYWLLDKTLEHIVLVHYRETQENSPSASINSNSGCVSDISTPQLLSEELDSRANHVYSVGENELSEPSDTTTVMNHEQRLHEINTLEWDELLVTNEPFKPAMPKGDRPSYFDQRNQVAINVANNLLGDMSSFNNPVESTESADGTISFTGSAYMPIMRGQKNLNVETKESIPITSLDNLLNDGLQSQDSFGRWINEVFTESPGTVIDPAIEPSISSIHNSYTDPTLDHRQPSVMEQIFNITDVSPAWAFSTEKTKILITGYFHNDFVHLAKSNILVVCGNTSVNADFIQPGVYRCLVQPHSTGLVQLYVSLDGHKPISQVLNFEYRAPLLQEPVVASEQIQKWEEFQVQMRLAYLLFSTSKSLSIMSTKLSPIALNEARKFAVKTSDISDSWIYLLNSIKENNTPFPQAREGVLEIILRSRLREWLIERVAEGSKKSTDFDVKGQGVIHLCAILGYTWAIYLFAWSGLSINFRDKFGWTALHWAAYYGREKMVAVLLSVGAKPNLVTDPSSRNPLGCTAADLASMNGYDGLSAYLSEKALVSHFNEMSLAGNVSGSLETSTTTDASYPDSISEEQMYMKETLAAYRTAADAAARIQAAFREHSLKQRTQAIEFSTPEDEARGIIAAMKIQHAYRNFETRKRMAAAARIQYRFRTWKIRKDFLNMRRQAIRIQAAFRGFQVRRQYRKIVWSVGVLEKAILRWRHKRKGFRGLQVAPAEVTEQPEIGIVEVEDFYRVSQKQAEERVEKAVVRVQAMFRSKKAQEEYRRMKLTYDEAALEYEELSHPDMKLSH 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79726525 79738546 + Tan0012825.1 Tan06g2739 757443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2739 919 ProSiteProfiles IQ motif profile. 770 796 - -
Tan06g2739 919 Pfam IPT/TIG domain 369 454 IPR002909 -
Tan06g2739 919 Gene3D Immunoglobulins 362 458 IPR013783 -
Tan06g2739 919 SMART iq_5 769 791 IPR000048 GO:0005515(InterPro)
Tan06g2739 919 SMART iq_5 872 894 IPR000048 GO:0005515(InterPro)
Tan06g2739 919 SMART iq_5 792 814 IPR000048 GO:0005515(InterPro)
Tan06g2739 919 SMART iq_5 716 738 IPR000048 GO:0005515(InterPro)
Tan06g2739 919 ProSiteProfiles IQ motif profile. 793 817 - -
Tan06g2739 919 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677(InterPro)
Tan06g2739 919 SUPERFAMILY E set domains 368 455 IPR014756 -
Tan06g2739 919 SMART CG_1_2 32 150 IPR005559 GO:0003677(InterPro)
Tan06g2739 919 Pfam Ankyrin repeats (3 copies) 577 665 IPR002110 GO:0005515(InterPro)
Tan06g2739 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 820 IPR027417 -
Tan06g2739 919 Coils Coil 886 906 - -
Tan06g2739 919 ProSiteProfiles IQ motif profile. 717 746 - -
Tan06g2739 919 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
Tan06g2739 919 SMART ANK_2a 605 634 IPR002110 GO:0005515(InterPro)
Tan06g2739 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 28 902 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Tan06g2739 919 Gene3D - 511 668 IPR036770 -
Tan06g2739 919 ProSiteProfiles IQ motif profile. 874 902 - -
Tan06g2739 919 Gene3D - 771 817 - -
Tan06g2739 919 Pfam IQ calmodulin-binding motif 795 814 IPR000048 GO:0005515(InterPro)
Tan06g2739 919 SUPERFAMILY Ankyrin repeat 569 667 IPR036770 -
Tan06g2739 919 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515(InterPro)
Tan06g2739 919 Pfam CG-1 domain 35 148 IPR005559 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2739 Tan-Chr6:79726525 Tan06g2741 Tan-Chr6:79726940 0.00E+00 dispersed
Tan06g2739 Tan-Chr6:79726525 Tan06g2740 Tan-Chr6:79726525 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27858 PF12796 Ank_2 8.50E-07 CL0465 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2739 K21596 - csv:101211298 1511.89