Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2741 ATGCTTAGGAATTTCCGGAAAGATGGACATAATTGGAAGAAAAAAAAGGACGGGAAGACAGTAAAAGAAGCGCATGAACACCTAAAAGTTGGTAATGTAGAAAGGATACATGTATACTATGCTCATGGCCTAGATAACCCAACCTTTGTTCGCCGGTGTTATTGGCTCCTTGATAAGACTCTTGAACACATTGTCCTCGTTCATTACCGTGAAACACAAGAGAATTCTCCATCCGCATCTATAAATTCAAATTCTGGTTGTGTCTCTGACATATCAACTCCTCAGCTTTTATCGGAAGAACTTGATTCTAGGGCTAATCATGTTTATTCTGTTGGTGAAAATGAACTGTCAGAGCCTAGTGACACTACAACAGTCATGAATCATGAACAACGGCTTCATGAGATCAACACACTTGAGTGGGATGAACTTCTTGTAACAAATGAACCTTTCAAACCTGCCATGCCTAAAGGAGACAGACCTTCATACTTTGACCAACGGAACCAAGTTGCAATAAATGTGGCCAACAATTTATTGGGGGACATGTCTTCGTTTAATAATCCAGTTGAGTCAACTGAGAGTGCTGACGGCACTATCAGTTTTACAGGGAGTGCCTATATGCCGATAATGCGTGGTCAGAAAAATTTGAATGTAGAGACTAAGGAATCCATTCCAATTACTTCATTGGACAATTTGTTAAATGATGGATTGCAAAGTCAGGACAGCTTTGGACGATGGATAAATGAAGTCTTCACTGAGTCTCCGGGTACAGTCATTGATCCTGCTATTGAGCCATCCATTTCATCCATTCACAATTCCTATACTGATCCGACATTAGATCACCGTCAACCTTCTGTTATGGAGCAAATTTTTAACATAACCGATGTCTCACCTGCATGGGCCTTTTCAACAGAAAAAACAAAGATTCTAATCACTGGATATTTTCACAATGATTTTGTACATCTCGCAAAGTCCAATATATTGGTAGTGTGTGGTAATACTAGTGTTAATGCTGATTTTATTCAACCTGGAGTTTATCGCTGTCTGGTACAACCACATTCAACAGGACTAGTACAATTATACGTGAGCTTAGATGGTCACAAACCTATAAGTCAAGTTTTGAATTTTGAGTATCGTGCACCACTTTTACAAGAGCCTGTAGTTGCTTCAGAACAGATCCAAAAGTGGGAAGAGTTTCAAGTTCAGATGCGGCTTGCTTATCTGTTGTTCTCTACATCCAAAAGCCTGAGCATCATGTCAACCAAATTGTCACCCATTGCCCTGAATGAGGCCAGGAAATTTGCTGTCAAAACTTCTGACATTTCTGATAGTTGGATTTATTTGTTAAACTCAATTAAAGAAAATAACACTCCATTTCCACAAGCAAGAGAGGGGGTTCTTGAGATCATTTTGAGAAGCAGGTTAAGGGAATGGCTGATAGAAAGAGTTGCTGAAGGCTCAAAGAAAAGCACTGATTTTGATGTCAAAGGTCAAGGAGTAATCCATTTGTGTGCCATATTAGGATATACCTGGGCTATATATCTATTTGCCTGGTCTGGTTTATCAATAAATTTTCGAGATAAATTTGGATGGACAGCTCTTCACTGGGCAGCTTATTATGGAAGGGAGAAAATGGTAGCAGTTCTTTTATCAGTGGGGGCGAAGCCGAACTTGGTCACCGATCCCTCATCAAGGAACCCTCTGGGATGTACCGCTGCAGATCTTGCATCTATGAATGGTTATGATGGCTTATCTGCTTATCTTTCTGAAAAGGCTTTGGTATCACATTTTAATGAGATGAGCTTGGCTGGAAATGTTAGTGGTTCATTGGAAACTAGTACAACAACCGATGCCAGTTACCCAGATAGCATCAGTGAGGAGCAGATGTATATGAAAGAAACATTAGCAGCTTACCGAACAGCAGCTGATGCAGCAGCACGCATACAAGCTGCATTCCGTGAGCATTCTTTAAAGCAAAGGACTCAAGCAATTGAATTCTCCACCCCTGAAGATGAAGCACGTGGTATTATTGCAGCCATGAAAATTCAACATGCCTACCGCAACTTTGAGACGCGAAAAAGAATGGCAGCTGCTGCTCGTATTCAATACAGATTCCGCACTTGGAAGATCCGCAAAGACTTCCTTAATATGCGCCGTCAAGCTATTAGAATTCAAGCTGCATTTAGAGGCTTCCAAGTGCGGAGGCAGTATCGTAAGATTGTATGGTCGGTAGGAGTACTCGAGAAAGCTATACTGCGCTGGCGTCATAAGAGAAAAGGCTTTCGTGGCCTTCAAGTTGCACCTGCTGAAGTGACAGAACAGCCTGAAATTGGCATAGTGGAGGTAGAGGACTTCTACCGTGTGTCTCAAAAACAAGCAGAAGAGCGAGTTGAGAAAGCTGTTGTACGGGTTCAGGCCATGTTTCGATCAAAGAAAGCACAAGAGGAGTATCGGAGGATGAAGTTAACCTACGATGAAGCAGCGCTGGAATATGAAGAACTTTCACATCCTGATATGAAATTGAGTCACTGA 2529 41.48 MLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRRCYWLLDKTLEHIVLVHYRETQENSPSASINSNSGCVSDISTPQLLSEELDSRANHVYSVGENELSEPSDTTTVMNHEQRLHEINTLEWDELLVTNEPFKPAMPKGDRPSYFDQRNQVAINVANNLLGDMSSFNNPVESTESADGTISFTGSAYMPIMRGQKNLNVETKESIPITSLDNLLNDGLQSQDSFGRWINEVFTESPGTVIDPAIEPSISSIHNSYTDPTLDHRQPSVMEQIFNITDVSPAWAFSTEKTKILITGYFHNDFVHLAKSNILVVCGNTSVNADFIQPGVYRCLVQPHSTGLVQLYVSLDGHKPISQVLNFEYRAPLLQEPVVASEQIQKWEEFQVQMRLAYLLFSTSKSLSIMSTKLSPIALNEARKFAVKTSDISDSWIYLLNSIKENNTPFPQAREGVLEIILRSRLREWLIERVAEGSKKSTDFDVKGQGVIHLCAILGYTWAIYLFAWSGLSINFRDKFGWTALHWAAYYGREKMVAVLLSVGAKPNLVTDPSSRNPLGCTAADLASMNGYDGLSAYLSEKALVSHFNEMSLAGNVSGSLETSTTTDASYPDSISEEQMYMKETLAAYRTAADAAARIQAAFREHSLKQRTQAIEFSTPEDEARGIIAAMKIQHAYRNFETRKRMAAAARIQYRFRTWKIRKDFLNMRRQAIRIQAAFRGFQVRRQYRKIVWSVGVLEKAILRWRHKRKGFRGLQVAPAEVTEQPEIGIVEVEDFYRVSQKQAEERVEKAVVRVQAMFRSKKAQEEYRRMKLTYDEAALEYEELSHPDMKLSH 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79726940 79738546 + Tan0012825.3 Tan06g2741 757445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2741 842 SUPERFAMILY Ankyrin repeat 492 590 IPR036770 -
Tan06g2741 842 Pfam IQ calmodulin-binding motif 718 737 IPR000048 GO:0005515(InterPro)
Tan06g2741 842 ProSiteProfiles IQ motif profile. 640 669 - -
Tan06g2741 842 Gene3D - 434 591 IPR036770 -
Tan06g2741 842 ProSiteProfiles Ankyrin repeat region circular profile. 528 556 - -
Tan06g2741 842 FunFam Calmodulin-binding transcription activator 2 693 740 - -
Tan06g2741 842 SMART iq_5 795 817 IPR000048 GO:0005515(InterPro)
Tan06g2741 842 SMART iq_5 715 737 IPR000048 GO:0005515(InterPro)
Tan06g2741 842 SMART iq_5 639 661 IPR000048 GO:0005515(InterPro)
Tan06g2741 842 SMART iq_5 692 714 IPR000048 GO:0005515(InterPro)
Tan06g2741 842 Gene3D Immunoglobulins 285 381 IPR013783 -
Tan06g2741 842 ProSiteProfiles CG-1 DNA-binding domain profile. 1 78 IPR005559 GO:0003677(InterPro)
Tan06g2741 842 Pfam Ankyrin repeats (3 copies) 500 588 IPR002110 GO:0005515(InterPro)
Tan06g2741 842 Pfam CG-1 domain 2 71 IPR005559 GO:0003677(InterPro)
Tan06g2741 842 SUPERFAMILY E set domains 291 378 IPR014756 -
Tan06g2741 842 ProSiteProfiles IQ motif profile. 797 825 - -
Tan06g2741 842 Gene3D - 694 740 - -
Tan06g2741 842 MobiDBLite consensus disorder prediction 1 20 - -
Tan06g2741 842 SMART CG_1_2 1 73 IPR005559 GO:0003677(InterPro)
Tan06g2741 842 ProSiteProfiles Ankyrin repeat profile. 528 560 IPR002110 GO:0005515(InterPro)
Tan06g2741 842 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 825 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Tan06g2741 842 Coils Coil 809 829 - -
Tan06g2741 842 ProSiteProfiles IQ motif profile. 693 719 - -
Tan06g2741 842 Pfam IPT/TIG domain 292 377 IPR002909 -
Tan06g2741 842 SMART ANK_2a 528 557 IPR002110 GO:0005515(InterPro)
Tan06g2741 842 ProSiteProfiles IQ motif profile. 716 740 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2739 Tan-Chr6:79726525 Tan06g2741 Tan-Chr6:79726940 0.00E+00 dispersed
Tan06g2741 Tan-Chr6:79726940 Tan10g1107 Tan-Chr10:10702082 1.30E-98 dispersed
Tan06g2740 Tan-Chr6:79726525 Tan06g2741 Tan-Chr6:79726940 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27860 PF12796 Ank_2 1.10E-06 CL0465 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2741 K21596 - csv:101211298 1361.67