Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2750 ATGGCATTTTGGTGGACTGTGCTTGTTCTAGGATTTGCTTACGCGATCTGTAGGTTTCTCTTGATGCTCATCCCTCCCAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTATGGACGACGGGAGTCAGACGCAGGAGAATAGCTACATCTACATTCCTCCTAGGGTAAAGACACAACAGCAAGACAAGAAAGTTCAATGTTACGAGCCCGCAACTATGAAATACCTGGGCTTTTTTCCTGCCTTGTCTCGAGACGAGGTCAAGGAGCGTGTTGCTTCAGCCAGGAAAGCACAGAAAGAATGGGCTAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTATATAATTGAACATCAAGAGCTTATTTGTGAGATCTCCTCCCGTGACACTGGGAAAACAATAGTGGATGCTAATATGGGAGAAATAATGGCGACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGAGCAACACTTCACAAGAAAGCCCGAGTAGAATTTCACCCCCTTGGAGTTATTGGGGCAATAGTCCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTGCTTGCAGCAGTCTTTGCTGGAAACGGCATTGTAGTCAAGGTTTCAGAACATGCAAGTTGGTCTGGATGCTTCTATATCAGGATAATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCTGAGAGTTTGGTCGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTATCTTCAGTAGACAAAATGATATTTGTTGGATCTACTGGTGTGGGTAGAATGATAATGAAAACTGCTGCTGAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCGTTTATTGTGTGTGAGGATGTAGATTTGGATCATGTCGTAAACGTTGCTCTCAGGGCTTCTATTACCTCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCATTAGCGGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCACCTACCGTTATTGTTGATGTTAACCATACCATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCGGCACAGATGATGAGGTCGTTCAGCTTGCAAATGATTCAAGATTTGGGCTTGGCTGTGCTGTGTTTTCTGGCAGTCAGCAGCGTGCCAAGAATATCGCTTCGCAGATACGTTCTGGAAGTGTTGCAATTAATGACTTTGCCACAAATTATTTGTGTCAGTCCTTGCCATTTGGTGGTGTGAAAGAGAGTGGATTCGGTAGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTTGTCAAAGCAGTCGTTGAGGATAGGTGGTGGCCGTACATTCAAACTAAGCATCCTAAGCCTCTTACGTATCCTGTTGCAGACAACGCTTTCGAGTTCCAGATGTCGCTCGTTGAAGCAACGTACGGTCTGAACATATGGGATCGATTAAGAGCATTGGTCAATGTTCTGAAGATGCTCTCCGAGCAGAACAGTTCGGCTAAAGATAACTCTGCCATTGGCGATGGAATTAAGAGAGCTGATTGA 1812 44.21 MAFWWTVLVLGFAYAICRFLLMLIPPNVPSIEVDASDVMDDGSQTQENSYIYIPPRVKTQQQDKKVQCYEPATMKYLGFFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRDTGKTIVDANMGEIMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFGTDDEVVQLANDSRFGLGCAVFSGSQQRAKNIASQIRSGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNSSAKDNSAIGDGIKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79791525 79800939 - Tan0002365.1 Tan06g2750 757454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2750 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 56 528 - -
Tan06g2750 603 SUPERFAMILY ALDH-like 51 529 IPR016161 GO:0016491(InterPro)
Tan06g2750 603 Coils Coil 572 592 - -
Tan06g2750 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Tan06g2750 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491(InterPro)
Tan06g2750 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491(InterPro)
Tan06g2750 603 FunFam aldehyde dehydrogenase 22A1 65 317 - -
Tan06g2750 603 CDD ALDH_F15-22 69 531 - -
Tan06g2750 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620(InterPro)
Tan06g2750 603 FunFam Aldehyde dehydrogenase A 301 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2750 Tan-Chr6:79791525 Tan09g2198 Tan-Chr9:71992034 5.10E-57 dispersed
Tan06g2750 Tan-Chr6:79791525 Tan06g2751 Tan-Chr6:79794649 4.10E-248 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2750 - - - 0.0