Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2765 ATGGGAACTCCACCAGCAGAGGAGCTTCTGAGGAAGATCCAAGAGCTGGAGGAGGGTCAAGCTCATCTCAAGAAAGAGATGTCCAAACTTCTTCTCTCTGGAACTCCCGCTGATTCCAACTCTGACCACCAAATCCACCATCAGCGTTCTCAATCGATATCGCCTCAGCGCTCTAGATTTGCTACGGCTCGGAGGAAAGGCGGCGCTGCTGCAGGTTTAGACGGCGCGGTGGCGGCGTGGAAGAAAGGCTCTTCCTCGTTTCGACATTCTTCTCCACTTCAGAGAGAGAGTAGGACTCGTGACCCTTTGAATGCCACCGCCGGAGTTGGAACCGGCGGTGGCTCTGGCCCCGCCGCCGTGAAATTCACCAATAAACAGTACCTCAATATCTTGCAGTCAATGGGACAGTCTGTTCATATTTTTGACCTAAATTATCGCATAATTTATTGGAACCGAGCTGCTGAAATTGTGTATGGATATTCTGCGGCGGAGGCTCTTGGCCAGGATGCCGTTCGGCTTCTAGTAGATCCCGACGACTTCACCGTTGCAAATGATGTAATTCATCGTGTCATGGCGGGTGAGAATTGGACTGGTCACTTCCCTGTAAAGAACAAGACGGGGCAAAAGTTTATAGTTGTTGCCACTAACACTCCATTCTACGATGATGACATGTTGGTCGGGATTATCTGTGTATCGAGCGATTCACGGCCGTTTCAAGAATTGAAGATTCCTTTTGCAGGAGATTCTAAACAGCAGGATGCAGATTCAACCATTGCTCGATCAAGAAGCACGGTTTCAACTAAACTTGGTCTTGATCCTCAGCAGCCTCTTCAAGTGGCAATTGCTTCAAAGTTATCGAACTTGGCATCGAAGGTAAGCAACAAAGTCAAGTCCAAAATTCGAACTGGAGAAAACAACTCGGATCGTGAAGGTGGAAGTGGAGATGGTTATCACTCTGATCATGGCTTTCCAGATGCAGCTCTTTCTGACCATCGGGAGGATGCAAATTCGAGTGGAGCTAGCACGCCTCGGGGAGATTCCACGGCTCATGGTGCATTTTCCCAGGGTGAAGAGAAACTATCTGGCAAACTGATCAGGGATTATGGCGATGAGGTTAAAGGAAAACCTACCATTCAGAAGATTTTATCCTCAAAAGCAGAAGAGTGGATTGCTAAGAAAGGTTTATCGTGGCCGTGGAAAGGGACCGAGCAGGAAGGAGGATCTGAAGCAAGGGCAGCCCGTTTTGTATGGCCCTGGTTACAAAATGACCAAGAAGCTGAACCAGCTAATTATAGGAGTCTCTCTTCATCTGGGAAATCAGAAATGCAGCAAAACGACGGTCATCGAGCAGTCAATAACGAGGCCTCCGGATCCTGGTCATCGTTCAATGTTAACAGCACTAGCAGTGCCAGTAGCTGTGGAAGTACCAGTAGTAGTGCTGTCAACAAGGTTGACACAGAAATCGACTGCTTGGATTATGAAATCTTGTGGGAAGACCTTACCATTGGGGAGCAAATAGGGCAAGGTTCTTGTGGAACTGTCTACCATGCGCTGTGGTATGGATCAGACGTTGCCGTCAAAGTTTTTTCCAAACAAGAGTATTCAGATGATGTGATTCTATCCTTCAGACAGGAGGTATCCCTGATGAAGAAGCTTAGGCACCCCAATATTCTTCTCTTTATGGGAGTTGTGACTTCACCTCAGCGTCTCTGCATTGTCACAGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACGCAGGCAAATTAGATTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCACGGGGCATGAACTATCTTCATCATTCCAATCCGCCTATTATTCACCGAGATTTGAAATCTTCGAACCTGTTAATTGATAAAAACTGGACTGTGAAGGTTGGGGATTTTGGTCTATCTCGACTTAAGCATGAGACTTATCTAACAACGAAGACCGGAAAGGGCACGCCTCAATGGATGGCGCCTGAAGTTCTTCGTAACGAGCCCTCGGATGAAAAGTCCGACATATACAGTTTCGGAGTCATATTGTGGGAGCTTGCAACCGAGAAGATCCCTTGGGAAAATCTCAATTCAATGCAGGTAATTGGTGCTGTTGGATTCATGAACCAACGACTTGAAATCCCCAAAGACGTGGATCCACAATGGGCTTCTATAATTGAAAGCTGCTGGCATAGCGAACCTGCAAACCGGCCATCATTCCAGGCTCTGATAGAAAGGCTCAGAGAGTTGCAGAGGAAGTTTGCTATTCAATTACAGGCAGCTCGTTCAGGTGGAGATAATAACCACCACCCTCCAAAGGAAACATAA 2343 47.2 MGTPPAEELLRKIQELEEGQAHLKKEMSKLLLSGTPADSNSDHQIHHQRSQSISPQRSRFATARRKGGAAAGLDGAVAAWKKGSSSFRHSSPLQRESRTRDPLNATAGVGTGGGSGPAAVKFTNKQYLNILQSMGQSVHIFDLNYRIIYWNRAAEIVYGYSAAEALGQDAVRLLVDPDDFTVANDVIHRVMAGENWTGHFPVKNKTGQKFIVVATNTPFYDDDMLVGIICVSSDSRPFQELKIPFAGDSKQQDADSTIARSRSTVSTKLGLDPQQPLQVAIASKLSNLASKVSNKVKSKIRTGENNSDREGGSGDGYHSDHGFPDAALSDHREDANSSGASTPRGDSTAHGAFSQGEEKLSGKLIRDYGDEVKGKPTIQKILSSKAEEWIAKKGLSWPWKGTEQEGGSEARAARFVWPWLQNDQEAEPANYRSLSSSGKSEMQQNDGHRAVNNEASGSWSSFNVNSTSSASSCGSTSSSAVNKVDTEIDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQRNAGKLDWRRRVHMALDIARGMNYLHHSNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKDVDPQWASIIESCWHSEPANRPSFQALIERLRELQRKFAIQLQAARSGGDNNHHPPKET 780
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79887293 79892838 + Tan0003045.2 Tan06g2765 757469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2765 780 Pfam PAS fold 126 232 IPR013767 GO:0006355(InterPro)
Tan06g2765 780 Gene3D Transferase(Phosphotransferase) domain 1 578 775 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 243 270 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 85 114 - -
Tan06g2765 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 SUPERFAMILY PYP-like sensor domain (PAS domain) 127 234 IPR035965 -
Tan06g2765 780 PANTHER SERINE-THREONINE PROTEIN KINASE 82 755 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan06g2765 780 SMART serkin_6 500 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 FunFam PAS domain-containing protein tyrosine kinase family protein 578 769 - -
Tan06g2765 780 ProSiteProfiles PAS repeat profile. 123 194 IPR000014 -
Tan06g2765 780 MobiDBLite consensus disorder prediction 427 452 - -
Tan06g2765 780 Gene3D Phosphorylase Kinase; domain 1 493 577 - -
Tan06g2765 780 Gene3D PAS domain 135 238 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 26 65 - -
Tan06g2765 780 SUPERFAMILY Protein kinase-like (PK-like) 483 751 IPR011009 -
Tan06g2765 780 CDD PAS 134 234 IPR000014 -
Tan06g2765 780 Coils Coil 6 26 - -
Tan06g2765 780 PRINTS Tyrosine kinase catalytic domain signature 660 670 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 PRINTS Tyrosine kinase catalytic domain signature 679 701 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 PRINTS Tyrosine kinase catalytic domain signature 574 587 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 PRINTS Tyrosine kinase catalytic domain signature 613 631 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 PRINTS Tyrosine kinase catalytic domain signature 723 745 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 NCBIfam PAS domain S-box protein 125 233 IPR000014 -
Tan06g2765 780 CDD STKc_MAP3K-like 506 752 - -
Tan06g2765 780 ProSiteProfiles Protein kinase domain profile. 500 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2765 780 MobiDBLite consensus disorder prediction 250 270 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 294 360 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 85 101 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 297 316 - -
Tan06g2765 780 FunFam PAS domain-containing protein tyrosine kinase 493 577 - -
Tan06g2765 780 SMART pas_2 125 192 IPR000014 -
Tan06g2765 780 MobiDBLite consensus disorder prediction 334 349 - -
Tan06g2765 780 MobiDBLite consensus disorder prediction 33 59 - -
Tan06g2765 780 Pfam Protein tyrosine and serine/threonine kinase 500 752 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2765 Tan-Chr6:79887293 Tan06g2767 Tan-Chr6:79887293 0.00E+00 dispersed
Tan06g2764 Tan-Chr6:79887293 Tan06g2765 Tan-Chr6:79887293 0.00E+00 tandem
Tan06g2765 Tan-Chr6:79887293 Tan06g2766 Tan-Chr6:79887293 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67824 PF07714 PK_Tyr_Ser-Thr 1.30E-69 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2765 - - - 0.0