Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2766 ATGTCCAAACTTCTTCTCTCTGGAACTCCCGCTGATTCCAACTCTGACCACCAAATCCACCATCAGCGTTCTCAATCGATATCGCCTCAGCGCTCTAGATTTGCTACGGCTCGGAGGAAAGGCGGCGCTGCTGCAGGTTTAGACGGCGCGGTGGCGGCGTGGAAGAAAGGCTCTTCCTCGTTTCGACATTCTTCTCCACTTCAGAGAGAGAGTAGGACTCGTGACCCTTTGAATGCCACCGCCGGAGTTGGAACCGGCGGTGGCTCTGGCCCCGCCGCCGTGAAATTCACCAATAAACAGTACCTCAATATCTTGCAGTCAATGGGACAGTCTGTTCATATTTTTGACCTAAATTATCGCATAATTTATTGGAACCGAGCTGCTGAAATTGTGTATGGATATTCTGCGGCGGAGGCTCTTGGCCAGGATGCCGTTCGGCTTCTAGTAGATCCCGACGACTTCACCGTTGCAAATGATGTAATTCATCGTGTCATGGCGGGTGAGAATTGGACTGGTCACTTCCCTGTAAAGAACAAGACGGGGCAAAAGTTTATAGTTGTTGCCACTAACACTCCATTCTACGATGATGACATGTTGGTCGGGATTATCTGTGTATCGAGCGATTCACGGCCGTTTCAAGAATTGAAGATTCCTTTTGCAGGAGATTCTAAACAGCAGGATGCAGATTCAACCATTGCTCGATCAAGAAGCACGGTTTCAACTAAACTTGGTCTTGATCCTCAGCAGCCTCTTCAAGTGGCAATTGCTTCAAAGTTATCGAACTTGGCATCGAAGGTAAGCAACAAAGTCAAGTCCAAAATTCGAACTGGAGAAAACAACTCGGATCGTGAAGGTGGAAGTGGAGATGGTTATCACTCTGATCATGGCTTTCCAGATGCAGCTCTTTCTGACCATCGGGAGGATGCAAATTCGAGTGGAGCTAGCACGCCTCGGGGAGATTCCACGGCTCATGGTGCATTTTCCCAGGGTGAAGAGAAACTATCTGGCAAACTGATCAGGGATTATGGCGATGAGGTTAAAGGAAAACCTACCATTCAGAAGATTTTATCCTCAAAAGCAGAAGAGTGGATTGCTAAGAAAGGTTTATCGTGGCCGTGGAAAGGGACCGAGCAGGAAGGAGGATCTGAAGCAAGGGCAGCCCGTTTTGTATGGCCCTGGTTACAAAATGACCAAGAAGCTGAACCAGCTAATTATAGGAGTCTCTCTTCATCTGGGAAATCAGAAATGCAGCAAAACGACGGTCATCGAGCAGTCAATAACGAGGCCTCCGGATCCTGGTCATCGTTCAATGTTAACAGCACTAGCAGTGCCAGTAGCTGTGGAAGTACCAGTAGTAGTGCTGTCAACAAGGTTGACACAGAAATCGACTGCTTGGATTATGAAATCTTGTGGGAAGACCTTACCATTGGGGAGCAAATAGGGCAAGGTTCTTGTGGAACTGTCTACCATGCGCTGTGGTATGGATCAGACGTTGCCGTCAAAGTTTTTTCCAAACAAGAGTATTCAGATGATGTGATTCTATCCTTCAGACAGGAGGTATCCCTGATGAAGAAGCTTAGGCACCCCAATATTCTTCTCTTTATGGGAGTTGTGACTTCACCTCAGCGTCTCTGCATTGTCACAGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACGCAGGCAAATTAGATTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCACGGGGCATGAACTATCTTCATCATTCCAATCCGCCTATTATTCACCGAGATTTGAAATCTTCGAACCTGTTAATTGATAAAAACTGGACTGTGAAGGTTGGGGATTTTGGTCTATCTCGACTTAAGCATGAGACTTATCTAACAACGAAGACCGGAAAGGGCACGCCTCAATGGATGGCGCCTGAAGTTCTTCGTAACGAGCCCTCGGATGAAAAGTCCGACATATACAGTTTCGGAGTCATATTGTGGGAGCTTGCAACCGAGAAGATCCCTTGGGAAAATCTCAATTCAATGCAGAAAATACGTAGGTAA 2052 46.98 MSKLLLSGTPADSNSDHQIHHQRSQSISPQRSRFATARRKGGAAAGLDGAVAAWKKGSSSFRHSSPLQRESRTRDPLNATAGVGTGGGSGPAAVKFTNKQYLNILQSMGQSVHIFDLNYRIIYWNRAAEIVYGYSAAEALGQDAVRLLVDPDDFTVANDVIHRVMAGENWTGHFPVKNKTGQKFIVVATNTPFYDDDMLVGIICVSSDSRPFQELKIPFAGDSKQQDADSTIARSRSTVSTKLGLDPQQPLQVAIASKLSNLASKVSNKVKSKIRTGENNSDREGGSGDGYHSDHGFPDAALSDHREDANSSGASTPRGDSTAHGAFSQGEEKLSGKLIRDYGDEVKGKPTIQKILSSKAEEWIAKKGLSWPWKGTEQEGGSEARAARFVWPWLQNDQEAEPANYRSLSSSGKSEMQQNDGHRAVNNEASGSWSSFNVNSTSSASSCGSTSSSAVNKVDTEIDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQRNAGKLDWRRRVHMALDIARGMNYLHHSNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWENLNSMQKIRR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79887293 79892838 + Tan0003045.3 Tan06g2766 757470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2766 683 MobiDBLite consensus disorder prediction 217 244 - -
Tan06g2766 683 Gene3D PAS domain 109 212 - -
Tan06g2766 683 FunFam PAS domain-containing protein tyrosine kinase 467 551 - -
Tan06g2766 683 MobiDBLite consensus disorder prediction 59 89 - -
Tan06g2766 683 ProSiteProfiles PAS repeat profile. 97 168 IPR000014 -
Tan06g2766 683 FunFam PAS domain-containing protein tyrosine kinase family protein 552 683 - -
Tan06g2766 683 Gene3D Transferase(Phosphotransferase) domain 1 552 683 - -
Tan06g2766 683 Pfam Protein tyrosine and serine/threonine kinase 474 680 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2766 683 ProSiteProfiles Protein kinase domain profile. 474 683 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2766 683 MobiDBLite consensus disorder prediction 401 426 - -
Tan06g2766 683 MobiDBLite consensus disorder prediction 1 40 - -
Tan06g2766 683 Gene3D Phosphorylase Kinase; domain 1 467 551 - -
Tan06g2766 683 CDD PAS 108 208 IPR000014 -
Tan06g2766 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g2766 683 CDD STKc_MAP3K-like 480 681 - -
Tan06g2766 683 PANTHER SERINE-THREONINE PROTEIN KINASE 56 679 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan06g2766 683 MobiDBLite consensus disorder prediction 224 244 - -
Tan06g2766 683 MobiDBLite consensus disorder prediction 268 334 - -
Tan06g2766 683 MobiDBLite consensus disorder prediction 1 33 - -
Tan06g2766 683 SUPERFAMILY PYP-like sensor domain (PAS domain) 101 208 IPR035965 -
Tan06g2766 683 MobiDBLite consensus disorder prediction 308 323 - -
Tan06g2766 683 MobiDBLite consensus disorder prediction 271 290 - -
Tan06g2766 683 MobiDBLite consensus disorder prediction 59 75 - -
Tan06g2766 683 SMART pas_2 99 166 IPR000014 -
Tan06g2766 683 SMART serkin_6 474 683 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g2766 683 NCBIfam PAS domain S-box protein 99 207 IPR000014 -
Tan06g2766 683 SUPERFAMILY Protein kinase-like (PK-like) 457 681 IPR011009 -
Tan06g2766 683 Pfam PAS fold 100 206 IPR013767 GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2766 Tan-Chr6:79887293 Tan09g0553 Tan-Chr9:49097452 1.70E-80 dispersed
Tan06g2765 Tan-Chr6:79887293 Tan06g2766 Tan-Chr6:79887293 0.00E+00 tandem
Tan06g2766 Tan-Chr6:79887293 Tan06g2767 Tan-Chr6:79887293 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67825 PF07714 PK_Tyr_Ser-Thr 3.50E-57 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2766 - - - 0.0