Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2773 ATGCTCCGGGGATTCATGAATCTGCTCTCTCTTTGCTGGAAGCCGTTCGGGCATGCTACTGAAAATTTCAGCTCTGTTGGAGTCATTGGAACCAATTGCGGTGGCAAAGATACCAAGGATAGCTTACTCTGGTTCTATGATTATGGAAAGTATGCTTCCGGTGAATTTTCCATGGCTGTTGTTCAGGCCAACCAGGTCCTTGAGGACCAGAGCCAGATTCAATCTGGTCCTTTTGGTACCTTTGTCGGAATCTACGATGGCCACGGCGGCCCCGACGCCGCTCGATACGTCTGCGATAACTTGTTTACGCGTTTTCAAGAGGAAGAACGAGGAGTTGTGACTCGTGAAGCCATTCTGAATGCTTTTCGTCAAACAGAGGAAGGGTTCACAGCCGTCGTGTCAGATTTGTGGAGTACTCGACCTCAGATAGCAACAGTTGGGACTTGCTGTCTAGTAGGGGTGATACACGAGCAGACGCTCTACGTGGCCAGTCTTGGAGATTCTCGTGCTGTGTTAGGGAAGAAAGTTGGCAGCACTGGAGAGATTGCTGCCATTCAGTTATCAACGGAGCATAATGCTAATCTTGAGGATATAAGGCATGAATTAAGAGATATGCATCCAAATGATCCTCAAATTGTGGTTCAAAGGCATGGAGTTTGGCGGGTGAAAGGCATTATACAGGTTTCTAGATCCATTGGAGATGTCTATATGAAACATGCTCGGTATAATACTGACAGAATCAATGCTAAATTTAGACTTCCTGAACCGATGAATATGCCTATATTGACTGCTGTACCTACGATTATTGCTCATCCTCTTCATCAAAACGATTCTTTTCTCATATTTGCATCCGATGGACTTTGGGAACATCTAACCAATGAAAAAGCAGTGGATATTGTCCATAATCATCCTCGTGCAGGAAGTGCAAAGAGGCTTGTGAAGGCAGCCCTTCAAGAAGCAGCGAGAAAACGAGAGATGCGGTACTCAGATCTACGAAAGATCGACAAGAAGGTTCGGCGTCATTTTCACGATGACATTAGTGTTATTGTTTTATTTTTCAACCACGACCTTATATCCAGGAATAATGTCCTCTTAGATCAGCCATTATCAGTCCGAAGTGCCTTCGATCATTGA 1134 44.97 MLRGFMNLLSLCWKPFGHATENFSSVGVIGTNCGGKDTKDSLLWFYDYGKYASGEFSMAVVQANQVLEDQSQIQSGPFGTFVGIYDGHGGPDAARYVCDNLFTRFQEEERGVVTREAILNAFRQTEEGFTAVVSDLWSTRPQIATVGTCCLVGVIHEQTLYVASLGDSRAVLGKKVGSTGEIAAIQLSTEHNANLEDIRHELRDMHPNDPQIVVQRHGVWRVKGIIQVSRSIGDVYMKHARYNTDRINAKFRLPEPMNMPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNEKAVDIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFFNHDLISRNNVLLDQPLSVRSAFDH 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79920422 79924436 + Tan0018371.1 Tan06g2773 757477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2773 377 Gene3D - 47 363 IPR036457 -
Tan06g2773 377 PANTHER PROTEIN PHOSPHATASE 53 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan06g2773 377 CDD PP2Cc 56 353 IPR001932 -
Tan06g2773 377 ProSiteProfiles PPM-type phosphatase domain profile. 52 353 IPR001932 -
Tan06g2773 377 Pfam Protein phosphatase 2C 80 320 IPR001932 -
Tan06g2773 377 SMART PP2C_4 49 351 IPR001932 -
Tan06g2773 377 SUPERFAMILY PP2C-like 64 354 IPR036457 -
Tan06g2773 377 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
Tan06g2773 377 FunFam Probable protein phosphatase 2C 42 46 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2773 Tan-Chr6:79920422 Tan08g1951 Tan-Chr8:71647066 9.80E-107 dispersed
Tan06g2773 Tan-Chr6:79920422 Tan06g2774 Tan-Chr6:79920422 1.70E-180 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2773 K01102 - csv:101207284 714.916