Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g2774 ATGCTCCGGGGATTCATGAATCTGCTCTCTCTTTGCTGGAAGCCGTTCGGGCATGCTACTGAAAATTTCAGCTCTGTTGGAGTCATTGGAACCAATTGCGGTGGCAAAGATACCAAGGATAGCTTACTCTGGTTCTATGATTATGGAAAGTATGCTTCCGGTGAATTTTCCATGGCTGTTGTTCAGGCCAACCAGGTCCTTGAGGACCAGAGCCAGATTCAATCTGGTCCTTTTGGTACCTTTGTCGGAATCTACGATGGCCACGGCGGCCCCGACGCCGCTCGATACGTCTGCGATAACTTGTTTACGCGTTTTCAAGAGGAAGAACGAGGAGTTGTGACTCGTGAAGCCATTCTGAATGCTTTTCGTCAAACAGAGGAAGGGTTCACAGCCGTCGTGTCAGATTTGTGGAGTACTCGACCTCAGATAGCAACAGTTGGGACTTGCTGTCTAGTAGGGGTGATACACGAGCAGACGCTCTACGTGGCCAGTCTTGGAGATTCTCGTGCTGTGTTAGGGAAGAAAGTTGGCAGCACTGGAGAGATTGCTGCCATTCAGTTATCAACGGAGCATAATGCTAATCTTGAGGATATAAGGCATGAATTAAGAGATATGCATCCAAATGATCCTCAAATTGTGGTTCAAAGGCATGGAGTTTGGCGGGTGAAAGGCATTATACAGGTTTCTAGATCCATTGGAGATGTCTATATGAAACATGCTCGGTATAATACTGACAGAATCAATGCTAAATTTAGACTTCCTGAACCGATGAATATGCCTATATTGACTGCTGTACCTACGATTATTGCTCATCCTCTTCATCAAAACGATTCTTTTCTCATATTTGCATCCGATGGACTTTGGGAACATCTAACCAATGAAAAAGCAGTGGATATTGTCCATAATCATCCTCGTGCAGTAAGTTTCCCTCCGCATCCAATTCTTTAG 948 45.25 MLRGFMNLLSLCWKPFGHATENFSSVGVIGTNCGGKDTKDSLLWFYDYGKYASGEFSMAVVQANQVLEDQSQIQSGPFGTFVGIYDGHGGPDAARYVCDNLFTRFQEEERGVVTREAILNAFRQTEEGFTAVVSDLWSTRPQIATVGTCCLVGVIHEQTLYVASLGDSRAVLGKKVGSTGEIAAIQLSTEHNANLEDIRHELRDMHPNDPQIVVQRHGVWRVKGIIQVSRSIGDVYMKHARYNTDRINAKFRLPEPMNMPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNEKAVDIVHNHPRAVSFPPHPIL 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 79920422 79924436 + Tan0018371.2 Tan06g2774 757478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g2774 315 SMART PP2C_4 49 307 IPR001932 -
Tan06g2774 315 CDD PP2Cc 56 308 IPR001932 -
Tan06g2774 315 Gene3D - 47 313 IPR036457 -
Tan06g2774 315 ProSiteProfiles PPM-type phosphatase domain profile. 52 315 IPR001932 -
Tan06g2774 315 SUPERFAMILY PP2C-like 64 303 IPR036457 -
Tan06g2774 315 PANTHER PROTEIN PHOSPHATASE 53 306 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan06g2774 315 Pfam Protein phosphatase 2C 80 303 IPR001932 -
Tan06g2774 315 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2774 Tan-Chr6:79920422 Tan08g1501 Tan-Chr8:62350594 1.00E-85 dispersed
Tan06g2773 Tan-Chr6:79920422 Tan06g2774 Tan-Chr6:79920422 1.70E-180 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g2774 K01102 - csv:101207284 580.867